We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
66.2
nTPM
Monaco:
133.5
nTPM
Schmiedel:
97.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
66.2
HPA sample
nTPM
gdT-cell nTPM: 37.2
Samples: 6
Max nTPM: 40.9
Min nTPM: 27.5
P10809_1007
27.5
P10809_1022
38.4
P10809_1041
40.9
P10809_1060
38.9
P10809_1077
36.5
P10809_1098
40.9
MAIT T-cell nTPM: 43.7
Samples: 6
Max nTPM: 54.0
Min nTPM: 32.4
P10809_1006
39.7
P10809_1024
54.0
P10809_1043
44.8
P10809_1062
42.9
P10809_1083
32.4
P10809_1097
48.6
Memory CD4 T-cell nTPM: 47.1
Samples: 6
Max nTPM: 57.0
Min nTPM: 37.9
P10809_1014
37.9
P10809_1026
57.0
P10809_1045
55.4
P10809_1064
41.0
P10809_1086
49.7
P10809_1113
41.3
Memory CD8 T-cell nTPM: 41.5
Samples: 5
Max nTPM: 47.4
Min nTPM: 30.7
P10809_1012
30.7
P10809_1027
47.4
P10809_1046
43.9
P10809_1065
38.6
P10809_1111
47.0
Naive CD4 T-cell nTPM: 66.2
Samples: 6
Max nTPM: 81.7
Min nTPM: 52.6
P10809_1015
52.6
P10809_1030
81.7
P10809_1049
79.3
P10809_1068
64.7
P10809_1085
60.7
P10809_1112
58.3
Naive CD8 T-cell nTPM: 62.2
Samples: 6
Max nTPM: 72.4
Min nTPM: 45.1
P10809_1016
48.6
P10809_1031
72.4
P10809_1050
69.3
P10809_1069
68.2
P10809_1087
45.1
P10809_1110
69.6
T-reg nTPM: 50.3
Samples: 6
Max nTPM: 68.4
Min nTPM: 31.2
P10809_1018
36.1
P10809_1037
62.6
P10809_1056
68.4
P10809_1075
31.2
P10809_1094
53.7
P10809_1106
49.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
133.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 97.0
Samples: 4
Max nTPM: 110.9
Min nTPM: 91.2
RHH5202_R3573
92.2
RHH5230_R3602
93.6
RHH5259_R3631
91.2
RHH5288_R3660
110.9
Effector memory CD8 T-cell nTPM: 104.4
Samples: 4
Max nTPM: 149.3
Min nTPM: 58.7
RHH5203_R3574
86.5
RHH5231_R3603
149.3
RHH5260_R3632
122.9
RHH5289_R3661
58.7
MAIT T-cell nTPM: 108.4
Samples: 4
Max nTPM: 118.3
Min nTPM: 92.5
RHH5233_R3605
92.5
RHH5205_R3576
117.7
RHH5262_R3634
105.0
RHH5297_R3663
118.3
Memory CD4 T-cell TFH nTPM: 108.4
Samples: 4
Max nTPM: 172.5
Min nTPM: 57.4
RHH5300_R3666
104.4
RHH5236_R3608
172.5
RHH5265_R3637
99.3
RHH5208_R3579
57.4
Memory CD4 T-cell Th1 nTPM: 91.9
Samples: 4
Max nTPM: 108.2
Min nTPM: 78.5
RHH5210_R3581
108.2
RHH5302_R3668
94.5
RHH5238_R3610
86.3
RHH5267_R3639
78.5
Memory CD4 T-cell Th1/Th17 nTPM: 86.0
Samples: 4
Max nTPM: 109.6
Min nTPM: 56.3
RHH5303_R3669
56.3
RHH5211_R3582
109.6
RHH5239_R3611
82.8
RHH5268_R3640
95.3
Memory CD4 T-cell Th17 nTPM: 121.2
Samples: 4
Max nTPM: 142.8
Min nTPM: 93.2
RHH5304_R3670
124.8
RHH5212_R3583
124.1
RHH5240_R3612
142.8
RHH5269_R3641
93.2
Memory CD4 T-cell Th2 nTPM: 109.1
Samples: 4
Max nTPM: 149.0
Min nTPM: 80.1
RHH5305_R3671
121.0
RHH5213_R3584
149.0
RHH5241_R3613
80.1
RHH5270_R3642
86.1
Naive CD4 T-cell nTPM: 132.9
Samples: 4
Max nTPM: 158.3
Min nTPM: 100.8
RHH5306_R3672
136.7
RHH5214_R3585
158.3
RHH5242_R3614
100.8
RHH5271_R3643
135.7
Naive CD8 T-cell nTPM: 133.6
Samples: 4
Max nTPM: 160.5
Min nTPM: 71.8
RHH5201_R3572
71.8
RHH5229_R3601
155.3
RHH5258_R3630
146.6
RHH5287_R3659
160.5
Non-Vd2 gdTCR nTPM: 98.1
Samples: 4
Max nTPM: 132.7
Min nTPM: 72.5
RHH5235_R3607
72.5
RHH5264_R3636
132.7
RHH5207_R3578
82.2
RHH5299_R3665
104.9
T-reg nTPM: 113.0
Samples: 4
Max nTPM: 122.4
Min nTPM: 105.7
RHH5301_R3667
105.7
RHH5237_R3609
116.9
RHH5266_R3638
106.8
RHH5209_R3580
122.4
Terminal effector memory CD4 T-cell nTPM: 113.2
Samples: 2
Max nTPM: 124.6
Min nTPM: 101.7
RHH5243_R3615
101.7
RHH5272_R3644
124.6
Terminal effector memory CD8 T-cell nTPM: 101.2
Samples: 4
Max nTPM: 115.4
Min nTPM: 79.4
RHH5232_R3604
97.5
RHH5204_R3575
112.5
RHH5261_R3633
115.4
RHH5296_R3662
79.4
Vd2 gdTCR nTPM: 128.6
Samples: 4
Max nTPM: 143.4
Min nTPM: 115.0
RHH5234_R3606
116.9
RHH5206_R3577
139.2
RHH5263_R3635
143.4
RHH5298_R3664
115.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
