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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
803.6
nTPM
Monaco:
381.0
nTPM
Schmiedel:
696.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
803.6
HPA sample
nTPM
gdT-cell nTPM: 59.2
Samples: 6
Max nTPM: 84.1
Min nTPM: 27.7
P10809_1007
64.0
P10809_1022
44.9
P10809_1041
72.0
P10809_1060
84.1
P10809_1077
27.7
P10809_1098
62.3
MAIT T-cell nTPM: 57.1
Samples: 6
Max nTPM: 86.5
Min nTPM: 41.0
P10809_1006
86.5
P10809_1024
51.8
P10809_1043
47.7
P10809_1062
41.0
P10809_1083
54.8
P10809_1097
60.5
Memory CD4 T-cell nTPM: 495.9
Samples: 6
Max nTPM: 679.1
Min nTPM: 343.2
P10809_1014
431.0
P10809_1026
679.1
P10809_1045
343.2
P10809_1064
370.9
P10809_1086
628.8
P10809_1113
522.4
Memory CD8 T-cell nTPM: 335.4
Samples: 5
Max nTPM: 474.1
Min nTPM: 161.2
P10809_1012
404.7
P10809_1027
474.1
P10809_1046
371.5
P10809_1065
161.2
P10809_1111
265.6
Naive CD4 T-cell nTPM: 468.4
Samples: 6
Max nTPM: 597.1
Min nTPM: 368.3
P10809_1015
437.9
P10809_1030
597.1
P10809_1049
447.3
P10809_1068
368.3
P10809_1085
438.8
P10809_1112
521.2
Naive CD8 T-cell nTPM: 297.4
Samples: 6
Max nTPM: 592.2
Min nTPM: 102.3
P10809_1016
301.3
P10809_1031
592.2
P10809_1050
241.0
P10809_1069
206.1
P10809_1087
102.3
P10809_1110
341.2
T-reg nTPM: 803.6
Samples: 6
Max nTPM: 1015.6
Min nTPM: 617.6
P10809_1018
677.6
P10809_1037
963.2
P10809_1056
1015.6
P10809_1075
617.6
P10809_1094
663.4
P10809_1106
884.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
381.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 223.9
Samples: 4
Max nTPM: 296.2
Min nTPM: 120.1
RHH5202_R3573
188.4
RHH5230_R3602
120.1
RHH5259_R3631
290.7
RHH5288_R3660
296.2
Effector memory CD8 T-cell nTPM: 153.2
Samples: 4
Max nTPM: 196.2
Min nTPM: 82.6
RHH5203_R3574
163.6
RHH5231_R3603
82.6
RHH5260_R3632
196.2
RHH5289_R3661
170.5
MAIT T-cell nTPM: 108.1
Samples: 4
Max nTPM: 167.1
Min nTPM: 62.7
RHH5233_R3605
167.1
RHH5205_R3576
62.7
RHH5262_R3634
70.8
RHH5297_R3663
131.6
Memory CD4 T-cell TFH nTPM: 381.0
Samples: 4
Max nTPM: 483.1
Min nTPM: 299.8
RHH5300_R3666
303.9
RHH5236_R3608
483.1
RHH5265_R3637
299.8
RHH5208_R3579
437.0
Memory CD4 T-cell Th1 nTPM: 250.3
Samples: 4
Max nTPM: 336.2
Min nTPM: 119.9
RHH5210_R3581
336.2
RHH5302_R3668
292.5
RHH5238_R3610
119.9
RHH5267_R3639
252.7
Memory CD4 T-cell Th1/Th17 nTPM: 286.3
Samples: 4
Max nTPM: 435.3
Min nTPM: 157.8
RHH5303_R3669
435.3
RHH5211_R3582
318.7
RHH5239_R3611
233.3
RHH5268_R3640
157.8
Memory CD4 T-cell Th17 nTPM: 265.2
Samples: 4
Max nTPM: 354.5
Min nTPM: 164.8
RHH5304_R3670
164.8
RHH5212_R3583
354.5
RHH5240_R3612
267.4
RHH5269_R3641
274.0
Memory CD4 T-cell Th2 nTPM: 312.4
Samples: 4
Max nTPM: 364.6
Min nTPM: 236.8
RHH5305_R3671
364.6
RHH5213_R3584
236.8
RHH5241_R3613
355.8
RHH5270_R3642
292.5
Naive CD4 T-cell nTPM: 364.1
Samples: 4
Max nTPM: 435.7
Min nTPM: 274.3
RHH5306_R3672
323.0
RHH5214_R3585
274.3
RHH5242_R3614
423.4
RHH5271_R3643
435.7
Naive CD8 T-cell nTPM: 242.5
Samples: 4
Max nTPM: 289.8
Min nTPM: 213.6
RHH5201_R3572
213.6
RHH5229_R3601
215.9
RHH5258_R3630
250.7
RHH5287_R3659
289.8
Non-Vd2 gdTCR nTPM: 223.2
Samples: 4
Max nTPM: 362.1
Min nTPM: 68.3
RHH5235_R3607
128.0
RHH5264_R3636
334.5
RHH5207_R3578
68.3
RHH5299_R3665
362.1
T-reg nTPM: 292.0
Samples: 4
Max nTPM: 499.0
Min nTPM: 206.1
RHH5301_R3667
499.0
RHH5237_R3609
254.5
RHH5266_R3638
206.1
RHH5209_R3580
208.3
Terminal effector memory CD4 T-cell nTPM: 81.0
Samples: 2
Max nTPM: 103.7
Min nTPM: 58.2
RHH5243_R3615
58.2
RHH5272_R3644
103.7
Terminal effector memory CD8 T-cell nTPM: 188.7
Samples: 4
Max nTPM: 338.2
Min nTPM: 113.1
RHH5232_R3604
169.2
RHH5204_R3575
338.2
RHH5261_R3633
134.2
RHH5296_R3662
113.1
Vd2 gdTCR nTPM: 212.1
Samples: 4
Max nTPM: 261.0
Min nTPM: 102.4
RHH5234_R3606
102.4
RHH5206_R3577
261.0
RHH5263_R3635
231.9
RHH5298_R3664
252.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.