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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
572.2
nTPM
Monaco:
480.4
nTPM
Schmiedel:
382.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
572.2
HPA sample
nTPM
gdT-cell nTPM: 12.0
Samples: 6
Max nTPM: 38.3
Min nTPM: 0.0
P10809_1007
16.2
P10809_1022
9.1
P10809_1041
38.3
P10809_1060
0.0
P10809_1077
3.1
P10809_1098
5.3
MAIT T-cell nTPM: 55.7
Samples: 6
Max nTPM: 139.0
Min nTPM: 8.5
P10809_1006
8.5
P10809_1024
20.3
P10809_1043
56.9
P10809_1062
12.7
P10809_1083
139.0
P10809_1097
96.7
Memory CD4 T-cell nTPM: 398.9
Samples: 6
Max nTPM: 478.3
Min nTPM: 283.4
P10809_1014
478.3
P10809_1026
438.9
P10809_1045
400.9
P10809_1064
283.4
P10809_1086
437.3
P10809_1113
354.5
Memory CD8 T-cell nTPM: 178.6
Samples: 5
Max nTPM: 278.3
Min nTPM: 89.6
P10809_1012
173.4
P10809_1027
89.6
P10809_1046
169.7
P10809_1065
278.3
P10809_1111
182.0
Naive CD4 T-cell nTPM: 303.4
Samples: 6
Max nTPM: 442.1
Min nTPM: 178.9
P10809_1015
297.0
P10809_1030
329.9
P10809_1049
442.1
P10809_1068
178.9
P10809_1085
256.3
P10809_1112
316.0
Naive CD8 T-cell nTPM: 111.1
Samples: 6
Max nTPM: 156.2
Min nTPM: 46.5
P10809_1016
122.0
P10809_1031
156.2
P10809_1050
121.4
P10809_1069
46.5
P10809_1087
116.8
P10809_1110
103.6
T-reg nTPM: 572.2
Samples: 6
Max nTPM: 762.8
Min nTPM: 295.2
P10809_1018
509.0
P10809_1037
762.8
P10809_1056
535.8
P10809_1075
295.2
P10809_1094
687.1
P10809_1106
643.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
480.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 107.6
Samples: 4
Max nTPM: 159.8
Min nTPM: 59.5
RHH5202_R3573
129.4
RHH5230_R3602
59.5
RHH5259_R3631
81.8
RHH5288_R3660
159.8
Effector memory CD8 T-cell nTPM: 53.9
Samples: 4
Max nTPM: 79.4
Min nTPM: 31.7
RHH5203_R3574
68.5
RHH5231_R3603
36.1
RHH5260_R3632
31.7
RHH5289_R3661
79.4
MAIT T-cell nTPM: 15.5
Samples: 4
Max nTPM: 22.1
Min nTPM: 0.0
RHH5233_R3605
0.0
RHH5205_R3576
18.7
RHH5262_R3634
21.3
RHH5297_R3663
22.1
Memory CD4 T-cell TFH nTPM: 480.4
Samples: 4
Max nTPM: 718.7
Min nTPM: 292.7
RHH5300_R3666
292.7
RHH5236_R3608
527.7
RHH5265_R3637
382.4
RHH5208_R3579
718.7
Memory CD4 T-cell Th1 nTPM: 341.2
Samples: 4
Max nTPM: 563.5
Min nTPM: 216.4
RHH5210_R3581
563.5
RHH5302_R3668
362.9
RHH5238_R3610
222.0
RHH5267_R3639
216.4
Memory CD4 T-cell Th1/Th17 nTPM: 361.8
Samples: 4
Max nTPM: 758.4
Min nTPM: 150.2
RHH5303_R3669
352.3
RHH5211_R3582
758.4
RHH5239_R3611
150.2
RHH5268_R3640
186.4
Memory CD4 T-cell Th17 nTPM: 290.0
Samples: 4
Max nTPM: 569.3
Min nTPM: 135.2
RHH5304_R3670
190.0
RHH5212_R3583
569.3
RHH5240_R3612
265.3
RHH5269_R3641
135.2
Memory CD4 T-cell Th2 nTPM: 322.2
Samples: 4
Max nTPM: 495.7
Min nTPM: 182.5
RHH5305_R3671
182.5
RHH5213_R3584
495.7
RHH5241_R3613
375.4
RHH5270_R3642
235.1
Naive CD4 T-cell nTPM: 312.4
Samples: 4
Max nTPM: 543.8
Min nTPM: 197.4
RHH5306_R3672
208.7
RHH5214_R3585
543.8
RHH5242_R3614
299.8
RHH5271_R3643
197.4
Naive CD8 T-cell nTPM: 122.2
Samples: 4
Max nTPM: 221.5
Min nTPM: 32.5
RHH5201_R3572
221.5
RHH5229_R3601
32.5
RHH5258_R3630
122.2
RHH5287_R3659
112.6
Non-Vd2 gdTCR nTPM: 0.0
Samples: 4
Max nTPM: 0.0
Min nTPM: 0.0
RHH5235_R3607
0.0
RHH5264_R3636
0.0
RHH5207_R3578
0.0
RHH5299_R3665
0.0
T-reg nTPM: 337.3
Samples: 4
Max nTPM: 428.0
Min nTPM: 262.1
RHH5301_R3667
276.1
RHH5237_R3609
383.0
RHH5266_R3638
262.1
RHH5209_R3580
428.0
Terminal effector memory CD4 T-cell nTPM: 40.5
Samples: 2
Max nTPM: 81.0
Min nTPM: 0.0
RHH5243_R3615
0.0
RHH5272_R3644
81.0
Terminal effector memory CD8 T-cell nTPM: 214.0
Samples: 4
Max nTPM: 687.8
Min nTPM: 0.0
RHH5232_R3604
111.4
RHH5204_R3575
0.0
RHH5261_R3633
687.8
RHH5296_R3662
56.9
Vd2 gdTCR nTPM: 14.8
Samples: 4
Max nTPM: 34.1
Min nTPM: 0.0
RHH5234_R3606
0.0
RHH5206_R3577
15.8
RHH5263_R3635
34.1
RHH5298_R3664
9.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
