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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
12.0
nTPM
Monaco:
4.1
nTPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
12.0
HPA sample
nTPM
gdT-cell nTPM: 6.3
Samples: 6
Max nTPM: 11.2
Min nTPM: 3.4
P10809_1007
8.3
P10809_1022
3.4
P10809_1041
11.2
P10809_1060
4.9
P10809_1077
4.4
P10809_1098
5.3
MAIT T-cell nTPM: 8.8
Samples: 6
Max nTPM: 13.2
Min nTPM: 6.8
P10809_1006
13.2
P10809_1024
7.7
P10809_1043
6.8
P10809_1062
7.8
P10809_1083
7.8
P10809_1097
9.7
Memory CD4 T-cell nTPM: 11.0
Samples: 6
Max nTPM: 17.6
Min nTPM: 6.6
P10809_1014
17.6
P10809_1026
9.8
P10809_1045
7.6
P10809_1064
12.5
P10809_1086
11.6
P10809_1113
6.6
Memory CD8 T-cell nTPM: 7.9
Samples: 5
Max nTPM: 10.9
Min nTPM: 4.8
P10809_1012
10.9
P10809_1027
5.8
P10809_1046
10.0
P10809_1065
8.2
P10809_1111
4.8
Naive CD4 T-cell nTPM: 12.0
Samples: 6
Max nTPM: 17.5
Min nTPM: 5.2
P10809_1015
17.5
P10809_1030
5.2
P10809_1049
9.3
P10809_1068
14.6
P10809_1085
10.3
P10809_1112
14.9
Naive CD8 T-cell nTPM: 10.1
Samples: 6
Max nTPM: 14.2
Min nTPM: 6.3
P10809_1016
14.2
P10809_1031
6.3
P10809_1050
10.2
P10809_1069
8.0
P10809_1087
12.0
P10809_1110
9.7
T-reg nTPM: 11.2
Samples: 6
Max nTPM: 17.8
Min nTPM: 6.6
P10809_1018
12.4
P10809_1037
10.3
P10809_1056
8.7
P10809_1075
17.8
P10809_1094
11.6
P10809_1106
6.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
