BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:5.6 nTPM
FANTOM5:2.4 Scaled Tags Per Million

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 5.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 4.7
2481 Female, age 94, left hemisphere 5.3
2289 Male, age 61, right hemisphere 5.1
2288 Male, age 75, left hemisphere 5.0
2290 Female, age 72, unknown 4.9
1854 Male, age 80, left hemisphere 4.8
2846 Female, age 79, unknown 4.2
1781 Male, age 74, unknown 4.1
1857 Female, age 85, left hemisphere 4.0
Globus pallidus, externus
nTPM: 3.7
2646 Male, age 61, right hemisphere 5.3
2567 Female, age 72, unknown 4.6
2395 Male, age 75, both hemispheres 3.4
2772 Female, age 79, unknown 2.7
1996 Male, age 80, right hemisphere 2.6
Globus pallidus, internus
nTPM: 4.0
2566 Female, age 72, unknown 4.6
2483 Female, age 94, right hemisphere 4.2
2111 Female, age 85, right hemisphere 4.1
2778 Female, age 91, both hemispheres 4.1
2037 Male, age 80, right hemisphere 3.9
2287 Male, age 75, right hemisphere 3.5
1818 Male, age 74, unknown 3.4
Nucleus accumbens
nTPM: 4.6
2824 Male, age 61, right hemisphere 6.3
1856 Female, age 91, right hemisphere 4.9
2391 Female, age 94, left hemisphere 4.9
2286 Male, age 75, left hemisphere 4.8
2698 Female, age 72, unknown 4.4
1806 Female, age 85, left hemisphere 4.1
2732 Male, age 80, right hemisphere 4.1
1783 Male, age 74, unknown 3.6
Nucleus basalis of Meynert
nTPM: 4.8
2569 Male, age 61, both hemispheres 5.2
2393 Male, age 80, right hemisphere 5.1
2484 Female, age 94, left hemisphere 4.7
2821 Male, age 75, both hemispheres 4.2
Nucleus of the diagonal band
nTPM: 5.1
2029 Male, age 61, right hemisphere 5.8
1979 Male, age 74, unknown 5.5
2775 Male, age 80, right hemisphere 5.5
2195 Female, age 85, both hemispheres 5.4
1812 Female, age 91, both hemispheres 3.3
Putamen
nTPM: 4.9
2489 Female, age 72, unknown 5.5
1838 Male, age 80, right hemisphere 5.4
1937 Female, age 91, right hemisphere 5.2
2466 Female, age 79, unknown 5.0
1829 Male, age 74, unknown 4.8
2647 Male, age 75, left hemisphere 4.7
2482 Female, age 94, left hemisphere 3.9
Septal nuclei
nTPM: 5.0
2059 Female, age 85, both hemispheres 5.9
2009 Female, age 91, both hemispheres 5.6
2394 Male, age 61, left hemisphere 5.1
1960 Male, age 74, unknown 5.0
2199 Male, age 80, right hemisphere 4.8
2629 Female, age 94, right hemisphere 4.6
2031 Female, age 72, unknown 4.2
Stria terminalis, bed nucleus
nTPM: 5.6
2201 Male, age 74, unknown 6.4
2486 Female, age 94, both hemispheres 5.4
1974 Female, age 91, both hemispheres 5.0

BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 2.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 0.6
FF:10164-103B2 76 years, female 0.6
Nucleus accumbens
Scaled Tags Per Million: 2.4
FF:10037-101F1 23-56 years, mixed 2.4
Putamen
Scaled Tags Per Million: 1.0
FF:10176-103C5 60 years, female 1.0
Globus pallidus
Scaled Tags Per Million: 1.7
FF:10161-103A8 76 years, female 1.9
FF:10175-103C4 60 years, female 1.5

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