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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
317.7
nTPM
FANTOM5:
382.2
Scaled Tags Per Million
Pig:
192.1
nTPM
Allen mouse:
12.3
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
317.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 104.3
2090
Male, age 80, both hemispheres
122.0
2301
Female, age 85, both hemispheres
107.2
1984
Male, age 76, both hemispheres
104.4
2188
Female, age 91, both hemispheres
83.6
Dorsal cochlear nucleus nTPM: 156.2
2370
Male, age 61, both hemispheres
186.8
2058
Male, age 76, both hemispheres
185.9
2187
Female, age 91, both hemispheres
162.0
2802
Male, age 74, right hemisphere
127.3
2378
Male, age 80, both hemispheres
119.1
Dorsal tegmental nucleus nTPM: 184.3
2083
Male, age 80, both hemispheres
208.7
2358
Male, age 61, both hemispheres
188.2
1936
Male, age 76, left hemisphere
179.4
2326
Male, age 74, both hemispheres
160.9
Dorsolateral tegmental area nTPM: 203.2
2654
Male, age 80, both hemispheres
238.0
2360
Male, age 74, both hemispheres
218.1
2141
Male, age 76, both hemispheres
209.2
2337
Male, age 61, both hemispheres
201.4
2751
Female, age 85, both hemispheres
149.4
Kolliker-Fuse nucleus nTPM: 206.6
2315
Male, age 76, right hemisphere
350.3
2163
Male, age 80, both hemispheres
168.2
2793
Female, age 91, left hemisphere
101.2
Lateral lemniscal nuclei nTPM: 113.6
2746
Female, age 85, left hemisphere
145.2
2453
Male, age 74, right hemisphere
134.8
2169
Male, age 76, both hemispheres
111.4
2036
Male, age 80, both hemispheres
106.9
2320
Female, age 91, left hemisphere
69.5
Lateral parabrachial nucleus nTPM: 165.4
2139
Female, age 85, right hemisphere
186.1
2013
Male, age 80, both hemispheres
163.2
2792
Male, age 76, both hemispheres
162.5
2790
Male, age 61, both hemispheres
149.8
Lateral vestibular nucleus nTPM: 153.6
2311
Male, age 80, both hemispheres
172.3
2184
Male, age 76, both hemispheres
134.9
Locus coeruleus nTPM: 317.7
2123
Female, age 91, both hemispheres
375.2
2014
Male, age 55, unknown
372.8
2317
Female, age 72, unknown
330.7
2788
Male, age 74, unknown
316.7
1980
Male, age 76, both hemispheres
310.0
2720
Male, age 74, both hemispheres
270.3
2162
Male, age 80, both hemispheres
248.2
Medial parabrachial nucleus nTPM: 157.2
2786
Male, age 76, both hemispheres
192.4
2170
Female, age 91, both hemispheres
190.8
2156
Male, age 61, both hemispheres
168.4
2854
Male, age 80, both hemispheres
125.9
2463
Female, age 85, right hemisphere
108.4
Medial periolivary nuclei nTPM: 137.9
2791
Male, age 74, right hemisphere
259.9
2063
Male, age 76, both hemispheres
149.2
2171
Female, age 85, both hemispheres
125.4
2081
Male, age 80, both hemispheres
81.3
2458
Female, age 91, both hemispheres
73.6
Motor facial nucleus nTPM: 137.3
2365
Male, age 74, right hemisphere
217.4
2062
Male, age 76, both hemispheres
157.8
2126
Male, age 61, both hemispheres
157.7
2795
Female, age 91, both hemispheres
109.5
2697
Female, age 85, both hemispheres
102.3
2327
Male, age 80, both hemispheres
79.2
Motor trigeminal nucleus nTPM: 146.8
2335
Male, age 61, both hemispheres
224.7
2309
Male, age 76, both hemispheres
211.9
2560
Male, age 74, both hemispheres
116.6
2321
Female, age 91, both hemispheres
92.5
2079
Male, age 80, both hemispheres
88.4
Nuclei of the trapezoid body nTPM: 125.9
1983
Male, age 76, both hemispheres
170.7
2735
Female, age 85, both hemispheres
154.1
2159
Male, age 61, both hemispheres
119.6
2166
Male, age 80, both hemispheres
96.3
2368
Female, age 91, both hemispheres
89.0
Nucleus raphe magnus nTPM: 134.5
2455
Male, age 74, both hemispheres
224.4
2051
Male, age 76, both hemispheres
150.6
2160
Male, age 61, both hemispheres
141.9
2172
Female, age 85, both hemispheres
124.5
2328
Male, age 80, both hemispheres
102.1
2459
Female, age 91, both hemispheres
63.6
Paramedian reticular nucleus nTPM: 222.0
2313
Male, age 61, both hemispheres
302.0
2057
Male, age 80, both hemispheres
234.2
2052
Male, age 76, both hemispheres
185.4
2050
Female, age 85, both hemispheres
166.6
Pedunculopontine tegmental nucleus nTPM: 207.3
1921
Female, age 85, both hemispheres
238.0
2334
Male, age 80, both hemispheres
222.4
2338
Male, age 61, both hemispheres
161.5
Pontine nuclei nTPM: 118.6
2787
Female, age 85, both hemispheres
176.8
1863
Male, age 55, unknown
143.8
2109
Female, age 72, unknown
138.4
1968
Male, age 76, left hemisphere
129.9
2727
Male, age 61, right hemisphere
115.9
2115
Male, age 80, left hemisphere
100.1
2454
Male, age 74, left hemisphere
75.5
2319
Female, age 91, both hemispheres
68.7
Pontine raphe nucleus nTPM: 184.9
2853
Male, age 76, midline
230.4
2122
Female, age 85, midline
139.4
Posteroventral cochlear nucleus nTPM: 139.1
2070
Male, age 76, both hemispheres
223.4
2752
Female, age 85, both hemispheres
205.8
2371
Male, age 61, both hemispheres
131.7
2135
Female, age 91, both hemispheres
67.7
2341
Male, age 80, both hemispheres
67.1
Principal sensory trigeminal nucleus nTPM: 116.5
2324
Male, age 76, both hemispheres
151.1
2158
Male, age 61, both hemispheres
139.1
2008
Male, age 80, left hemisphere
116.9
2367
Female, age 91, left hemisphere
58.9
Reticular pontine nucleus, caudal nTPM: 116.5
2092
Male, age 76, both hemispheres
171.6
2559
Male, age 74, both hemispheres
137.4
2332
Male, age 80, right hemisphere
89.2
2457
Female, age 91, both hemispheres
67.7
Reticular pontine nucleus, oral nTPM: 127.9
1939
Male, age 80, both hemispheres
185.9
2167
Male, age 76, both hemispheres
153.8
2012
Female, age 85, both hemispheres
139.5
2361
Male, age 74, both hemispheres
84.5
2366
Female, age 91, both hemispheres
75.8
Reticulotegmental nucleus nTPM: 133.2
2325
Male, age 76, both hemispheres
162.3
2452
Male, age 74, both hemispheres
130.7
2333
Male, age 80, both hemispheres
127.5
2322
Female, age 91, both hemispheres
112.2
Spinal trigeminal nucleus, oral nTPM: 179.4
1978
Male, age 76, both hemispheres
232.4
2737
Female, age 85, both hemispheres
171.2
2164
Male, age 80, both hemispheres
134.6
Subcoeruleus area nTPM: 175.3
2323
Female, age 91, left hemisphere
283.1
1958
Male, age 80, both hemispheres
192.2
2451
Male, age 74, both hemispheres
171.1
2369
Female, age 85, left hemisphere
126.5
2089
Male, age 76, left hemisphere
103.8
Superior olive nTPM: 148.3
2364
Male, age 74, right hemisphere
271.9
2020
Male, age 76, both hemispheres
145.3
1875
Female, age 85, both hemispheres
144.8
2329
Male, age 80, right hemisphere
93.0
2561
Female, age 91, both hemispheres
86.5
Ventral periolivary nuclei nTPM: 118.4
2023
Male, age 76, both hemispheres
146.0
2165
Male, age 80, both hemispheres
125.3
2130
Female, age 85, both hemispheres
123.9
2794
Female, age 91, left hemisphere
78.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 135.2
2449
Male, age 74, both hemispheres
168.6
2359
Male, age 61, both hemispheres
161.1
1959
Male, age 76, both hemispheres
158.9
2840
Female, age 85, both hemispheres
137.4
2161
Male, age 80, both hemispheres
111.0
2456
Female, age 91, both hemispheres
74.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
192.1
Pig sample
Sample description
nTPM
Pons nTPM: 192.1
Samples: 4
Max nTPM: 274.8
Min nTPM: 146.2
Sample A
Female
146.2
Sample B
Female
193.9
Sample C
Male
274.8
Sample D
Male
153.4
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
