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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
88.1
nTPM
Monaco:
91.3
nTPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
88.1
HPA sample
nTPM
gdT-cell nTPM: 38.8
Samples: 6
Max nTPM: 52.1
Min nTPM: 33.1
P10809_1007
33.5
P10809_1022
52.1
P10809_1041
44.9
P10809_1060
33.1
P10809_1077
35.0
P10809_1098
34.4
MAIT T-cell nTPM: 43.4
Samples: 6
Max nTPM: 60.8
Min nTPM: 31.7
P10809_1006
31.7
P10809_1024
60.8
P10809_1043
50.1
P10809_1062
43.5
P10809_1083
35.8
P10809_1097
38.3
Memory CD4 T-cell nTPM: 55.0
Samples: 6
Max nTPM: 68.0
Min nTPM: 43.7
P10809_1014
49.7
P10809_1026
57.8
P10809_1045
68.0
P10809_1064
55.0
P10809_1086
43.7
P10809_1113
55.9
Memory CD8 T-cell nTPM: 38.4
Samples: 5
Max nTPM: 43.4
Min nTPM: 33.0
P10809_1012
41.0
P10809_1027
36.4
P10809_1046
43.4
P10809_1065
33.0
P10809_1111
38.2
Naive CD4 T-cell nTPM: 45.1
Samples: 6
Max nTPM: 64.4
Min nTPM: 28.4
P10809_1015
32.2
P10809_1030
50.5
P10809_1049
64.4
P10809_1068
51.8
P10809_1085
28.4
P10809_1112
43.0
Naive CD8 T-cell nTPM: 37.0
Samples: 6
Max nTPM: 47.4
Min nTPM: 28.2
P10809_1016
28.2
P10809_1031
39.5
P10809_1050
38.8
P10809_1069
47.4
P10809_1087
34.0
P10809_1110
33.8
T-reg nTPM: 88.1
Samples: 6
Max nTPM: 128.9
Min nTPM: 69.3
P10809_1018
78.1
P10809_1037
95.4
P10809_1056
128.9
P10809_1075
84.0
P10809_1094
73.1
P10809_1106
69.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
