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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
40.3
nTPM
HPA Brain:
55.5
nTPM
GTEx:
40.3
nTPM
FANTOM5:
119.7
Scaled Tags Per Million
Pig:
55.3
nTPM
Mouse:
35.5
nTPM
Allen mouse:
13.4
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
55.5
Sample id
Sample description
nTPM
Amygdala nTPM: 55.0
2517
Female, age 94, left hemisphere
58.5
2814
Male, age 76, right hemisphere
57.9
2514
Male, age 75, right hemisphere
53.0
1987
Female, age 91, left hemisphere
52.9
2695
Female, age 67, right hemisphere
52.6
Basal amygdala nTPM: 52.2
2110
Male, age 80, left hemisphere
54.7
1955
Male, age 76, both hemispheres
54.2
2243
Female, age 91, right hemisphere
53.2
2685
Female, age 94, left hemisphere
52.9
2609
Male, age 75, right hemisphere
49.3
2827
Female, age 67, right hemisphere
48.8
Central amygdala nTPM: 50.8
2701
Female, age 91, right hemisphere
56.4
1905
Male, age 76, both hemispheres
55.4
2239
Male, age 80, left hemisphere
54.0
2515
Male, age 75, right hemisphere
45.2
2826
Female, age 94, left hemisphere
43.1
Corticomedial amygdala nTPM: 55.5
2429
Female, age 94, left hemisphere
66.5
2240
Male, age 76, both hemispheres
59.8
2535
Female, age 67, right hemisphere
56.5
2428
Male, age 75, right hemisphere
51.4
2242
Female, age 91, right hemisphere
49.8
2829
Male, age 80, left hemisphere
49.3
Lateral amygdala nTPM: 52.2
1883
Male, age 76, both hemispheres
55.4
2255
Female, age 91, right hemisphere
54.6
2516
Male, age 75, right hemisphere
54.2
2256
Male, age 80, left hemisphere
51.8
2830
Female, age 67, right hemisphere
49.1
2534
Female, age 94, left hemisphere
48.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
40.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 40.3
Samples: 152
Max nTPM: 69.4
Min nTPM: 14.4
Std nTPM: 9.4
Median nTPM: 41.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
69.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
66.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
61.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
60.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
57.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
56.6
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
55.7
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
54.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
52.8
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
52.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
51.9
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
51.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
51.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
51.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
51.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
50.9
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
50.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
50.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
50.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
49.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
49.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
49.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
48.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
48.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
48.4
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
48.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
47.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
47.8
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
47.7
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
46.5
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
46.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
46.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
45.6
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
45.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
45.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
45.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
45.1
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
45.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
45.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
45.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
45.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
44.3
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
44.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
44.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
44.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
44.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
44.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
44.0
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
43.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
43.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
43.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
43.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
43.7
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
43.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
43.2
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
43.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
43.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
43.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
42.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
42.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
42.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
42.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
42.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
42.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
42.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
42.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
42.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
42.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
41.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
41.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
41.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
41.7
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
41.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
41.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
41.1
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
41.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
40.9
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
40.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
40.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
40.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
40.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
40.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
40.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
40.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
40.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
40.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
39.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
39.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
39.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
39.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
39.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
39.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
39.1
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
38.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
38.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
38.6
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
38.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
38.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
38.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
37.9
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
37.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
37.7
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
37.6
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
37.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
37.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
37.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
37.4
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
37.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
36.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
36.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
36.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
36.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
36.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
36.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
36.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
35.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
35.5
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
35.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
35.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
35.3
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
35.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
34.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
34.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
34.0
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
33.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
33.6
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
33.5
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
33.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
32.8
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
32.8
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
31.6
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
29.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
29.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
29.1
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
29.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
29.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
28.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
27.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
27.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
26.9
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
24.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
22.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
21.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
21.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
19.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
19.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
18.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
18.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
17.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
17.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
15.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
14.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
35.5
Mouse sample
Sample description
nTPM
Amygdala nTPM: 35.6
Samples: 4
Max nTPM: 41.0
Min nTPM: 26.8
Sample A
Male
38.0
Sample B
Male
41.0
Sample C
Female
26.8
Sample D
Female
36.4
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
