HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:46.4 nTPM
HPA Brain:56.7 nTPM
GTEx:46.4 nTPM
FANTOM5:127.7 Scaled Tags Per Million
Pig:55.2 nTPM
Mouse:38.9 nTPM
Allen mouse:12.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017335Antibody HPA018011
Glial cells MediumHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 56.7
Sample id Sample description nTPM
Hippocampus
nTPM: 53.6
1911 Female, age 85, right hemisphere 59.1
2529 Female, age 94, left hemisphere 58.5
2621 Female, age 67, right hemisphere 58.1
2148 Female, age 91, left hemisphere 54.7
1898 Male, age 80, left hemisphere 47.6
1855 Male, age 76, left hemisphere 43.6
Dentate gyrus
nTPM: 54.3
2246 Female, age 85, both hemispheres 59.3
2531 Female, age 67, both hemispheres 58.0
2010 Male, age 76, both hemispheres 56.5
2528 Male, age 74, both hemispheres 55.4
1927 Female, age 91, both hemispheres 51.4
2530 Female, age 94, left hemisphere 45.3
Entorhinal gyrus
nTPM: 55.6
1787 Male, age 76, left hemisphere 58.8
2764 Male, age 80, right hemisphere 56.4
2117 Female, age 91, right hemisphere 56.2
2613 Female, age 94, left hemisphere 54.3
2686 Male, age 75, right hemisphere 54.0
1938 Female, age 85, left hemisphere 53.9
Hippocampus, CA1
nTPM: 53.0
2045 Male, age 76, both hemispheres 56.0
2527 Male, age 74, both hemispheres 55.4
2082 Female, age 91, right hemisphere 53.3
1873 Female, age 85, both hemispheres 50.2
2749 Male, age 80, left hemisphere 50.1
Hippocampus, CA2
nTPM: 52.6
1940 Female, age 85, left hemisphere 55.6
1892 Male, age 76, both hemispheres 53.4
1963 Male, age 80, left hemisphere 53.4
2113 Female, age 91, right hemisphere 52.2
2437 Female, age 94, left hemisphere 51.7
2249 Male, age 74, both hemispheres 49.4
Hippocampus, CA3
nTPM: 53.5
1891 Female, age 85, both hemispheres 60.9
2137 Male, age 80, left hemisphere 55.7
1867 Male, age 76, both hemispheres 53.6
2436 Male, age 74, both hemispheres 52.4
2861 Female, age 67, both hemispheres 51.2
2620 Female, age 94, left hemisphere 47.5
Parahippocampal cortex
nTPM: 56.7
2018 Male, age 76, both hemispheres 64.6
2693 Female, age 94, both hemispheres 63.0
2692 Male, age 74, both hemispheres 60.1
2532 Female, age 72, left hemisphere 57.5
1850 Male, age 80, both hemispheres 56.8
2245 Female, age 91, both hemispheres 55.6
1990 Female, age 91, right hemisphere 55.1
1933 Female, age 85, both hemispheres 54.9
2622 Female, age 67, right hemisphere 51.6
2250 Female, age 67, right hemisphere 48.1
Perirhinal gyrus
nTPM: 53.2
1794 Male, age 80, right hemisphere 57.1
1841 Female, age 85, right hemisphere 56.5
2521 Female, age 94, right hemisphere 54.5
2848 Male, age 76, right hemisphere 52.0
1847 Female, age 91, left hemisphere 45.9
Subiculum
nTPM: 54.7
2042 Male, age 76, both hemispheres 64.1
1901 Male, age 80, both hemispheres 58.3
1977 Female, age 85, both hemispheres 56.6
2619 Male, age 74, both hemispheres 50.2
2729 Female, age 91, right hemisphere 49.5
2438 Female, age 94, left hemisphere 49.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.4
Samples: 197

Max nTPM: 90.4
Min nTPM: 13.4
Std nTPM: 10.0
Median nTPM: 45.8
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 90.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 79.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 76.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 75.2
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 67.6
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 67.1
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 67.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 65.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 65.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 64.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 64.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 127.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 127.7
FF:10169-103B7 60 years, female 138.1
FF:10153-102I9 76 years, female 117.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 55.2
Pig sample Sample description nTPM
Subiculum
nTPM: 54.8
Samples: 4

Max nTPM: 57.7
Min nTPM: 50.7
Sample A Female 50.7
Sample B Female 55.2
Sample C Male 55.5
Sample D Male 57.7
Dorsal hippocampus
nTPM: 55.2
Samples: 4

Max nTPM: 60.8
Min nTPM: 50.5
Sample A Female 50.5
Sample B Female 51.3
Sample C Male 58.2
Sample D Male 60.8
Entorhinal cortex
nTPM: 49.1
Samples: 4

Max nTPM: 53.3
Min nTPM: 45.5
Sample A Female 53.3
Sample B Female 46.4
Sample C Male 45.5
Sample D Male 51.3
Ventral hippocampus
nTPM: 54.8
Samples: 4

Max nTPM: 59.3
Min nTPM: 51.0
Sample A Female 51.0
Sample B Female 54.4
Sample C Male 54.4
Sample D Male 59.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 39.0
Samples: 4

Max nTPM: 42.5
Min nTPM: 35.3
Sample A Male 39.5
Sample B Male 42.5
Sample C Female 38.5
Sample D Female 35.3
Hippocampal formation
nTPM: 37.1
Samples: 4

Max nTPM: 41.8
Min nTPM: 33.5
Sample A Male 36.6
Sample B Male 41.8
Sample C Female 33.5
Sample D Female 36.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.0
69818030 Antisense, RP_050510_04_C06, Mouse strain C57BL/6J (56 days, male) 12.0

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