HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:15.3 nTPM
HPA Brain:49.0 nTPM
GTEx:15.3 nTPM
FANTOM5:31.7 Scaled Tags Per Million
Pig:33.5 nTPM
Mouse:75.8 nTPM
Allen mouse:11.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030117Antibody HPA030118
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.0
Sample id Sample description nTPM
Hippocampus
nTPM: 27.5
2529 Female, age 94, left hemisphere 33.0
2621 Female, age 67, right hemisphere 29.9
1911 Female, age 85, right hemisphere 27.4
2148 Female, age 91, left hemisphere 25.8
1898 Male, age 80, left hemisphere 24.7
1855 Male, age 76, left hemisphere 24.0
Dentate gyrus
nTPM: 25.8
2531 Female, age 67, both hemispheres 33.3
2246 Female, age 85, both hemispheres 28.8
2010 Male, age 76, both hemispheres 23.7
2528 Male, age 74, both hemispheres 23.2
1927 Female, age 91, both hemispheres 22.8
2530 Female, age 94, left hemisphere 22.7
Entorhinal gyrus
nTPM: 49.0
2613 Female, age 94, left hemisphere 86.3
2686 Male, age 75, right hemisphere 49.2
2764 Male, age 80, right hemisphere 42.5
1938 Female, age 85, left hemisphere 42.4
1787 Male, age 76, left hemisphere 41.8
2117 Female, age 91, right hemisphere 31.6
Hippocampus, CA1
nTPM: 25.8
2527 Male, age 74, both hemispheres 28.5
2082 Female, age 91, right hemisphere 26.3
1873 Female, age 85, both hemispheres 25.5
2045 Male, age 76, both hemispheres 24.8
2749 Male, age 80, left hemisphere 24.1
Hippocampus, CA2
nTPM: 25.2
2437 Female, age 94, left hemisphere 31.3
1892 Male, age 76, both hemispheres 28.4
2113 Female, age 91, right hemisphere 26.1
1940 Female, age 85, left hemisphere 24.3
1963 Male, age 80, left hemisphere 21.7
2249 Male, age 74, both hemispheres 19.1
Hippocampus, CA3
nTPM: 29.2
2861 Female, age 67, both hemispheres 40.0
2620 Female, age 94, left hemisphere 38.9
1891 Female, age 85, both hemispheres 29.2
1867 Male, age 76, both hemispheres 26.0
2137 Male, age 80, left hemisphere 23.7
2436 Male, age 74, both hemispheres 17.4
Parahippocampal cortex
nTPM: 39.3
2622 Female, age 67, right hemisphere 59.1
2692 Male, age 74, both hemispheres 45.5
2693 Female, age 94, both hemispheres 42.5
1933 Female, age 85, both hemispheres 38.1
2245 Female, age 91, both hemispheres 37.1
2532 Female, age 72, left hemisphere 37.0
1850 Male, age 80, both hemispheres 35.4
1990 Female, age 91, right hemisphere 35.2
2250 Female, age 67, right hemisphere 32.0
2018 Male, age 76, both hemispheres 30.7
Perirhinal gyrus
nTPM: 37.6
2848 Male, age 76, right hemisphere 42.4
1847 Female, age 91, left hemisphere 40.5
2521 Female, age 94, right hemisphere 35.5
1794 Male, age 80, right hemisphere 35.4
1841 Female, age 85, right hemisphere 34.0
Subiculum
nTPM: 31.6
2619 Male, age 74, both hemispheres 43.0
1977 Female, age 85, both hemispheres 34.5
2438 Female, age 94, left hemisphere 34.0
1901 Male, age 80, both hemispheres 27.7
2042 Male, age 76, both hemispheres 27.3
2729 Female, age 91, right hemisphere 23.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.3
Samples: 197

Max nTPM: 40.5
Min nTPM: 2.6
Std nTPM: 6.2
Median nTPM: 14.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 40.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 35.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 32.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 31.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 30.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 29.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 29.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 28.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 28.5
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 27.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 27.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.7
FF:10153-102I9 76 years, female 39.5
FF:10169-103B7 60 years, female 23.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.5
Pig sample Sample description nTPM
Subiculum
nTPM: 33.5
Samples: 4

Max nTPM: 43.0
Min nTPM: 25.6
Sample A Female 43.0
Sample B Female 30.3
Sample C Male 35.0
Sample D Male 25.6
Dorsal hippocampus
nTPM: 22.0
Samples: 4

Max nTPM: 25.9
Min nTPM: 16.1
Sample A Female 25.6
Sample B Female 25.9
Sample C Male 20.5
Sample D Male 16.1
Entorhinal cortex
nTPM: 28.4
Samples: 4

Max nTPM: 36.6
Min nTPM: 20.4
Sample A Female 29.7
Sample B Female 20.4
Sample C Male 36.6
Sample D Male 26.7
Ventral hippocampus
nTPM: 25.5
Samples: 4

Max nTPM: 31.5
Min nTPM: 20.3
Sample A Female 21.2
Sample B Female 20.3
Sample C Male 31.5
Sample D Male 28.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 75.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 75.8
Samples: 4

Max nTPM: 93.7
Min nTPM: 67.5
Sample A Male 67.5
Sample B Male 74.5
Sample C Female 67.6
Sample D Female 93.7
Hippocampal formation
nTPM: 40.6
Samples: 4

Max nTPM: 52.3
Min nTPM: 27.8
Sample A Male 52.3
Sample B Male 37.5
Sample C Female 27.8
Sample D Female 44.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.3
74583174 Antisense, RP_051214_02_F12, Mouse strain C57BL/6J (56 days, male) 11.4
68843937 Antisense, RP_050217_02_E11, Mouse strain C57BL/6J (56 days, male) 11.2

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