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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
342.2
nTPM
FANTOM5:
318.6
Scaled Tags Per Million
Pig:
204.1
nTPM
Allen mouse:
1.9
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
342.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 110.8
2301
Female, age 85, both hemispheres
118.4
2090
Male, age 80, both hemispheres
114.9
1984
Male, age 76, both hemispheres
110.4
2188
Female, age 91, both hemispheres
99.3
Dorsal cochlear nucleus nTPM: 144.5
2058
Male, age 76, both hemispheres
189.4
2370
Male, age 61, both hemispheres
172.6
2187
Female, age 91, both hemispheres
160.3
2802
Male, age 74, right hemisphere
112.6
2378
Male, age 80, both hemispheres
87.5
Dorsal tegmental nucleus nTPM: 154.1
2083
Male, age 80, both hemispheres
186.6
2358
Male, age 61, both hemispheres
155.7
1936
Male, age 76, left hemisphere
153.7
2326
Male, age 74, both hemispheres
120.3
Dorsolateral tegmental area nTPM: 155.5
2141
Male, age 76, both hemispheres
219.4
2654
Male, age 80, both hemispheres
172.9
2360
Male, age 74, both hemispheres
152.1
2751
Female, age 85, both hemispheres
149.5
2337
Male, age 61, both hemispheres
83.4
Kolliker-Fuse nucleus nTPM: 145.5
2163
Male, age 80, both hemispheres
184.7
2315
Male, age 76, right hemisphere
136.8
2793
Female, age 91, left hemisphere
114.9
Lateral lemniscal nuclei nTPM: 186.9
2036
Male, age 80, both hemispheres
231.5
2453
Male, age 74, right hemisphere
209.0
2169
Male, age 76, both hemispheres
204.6
2746
Female, age 85, left hemisphere
178.4
2320
Female, age 91, left hemisphere
110.9
Lateral parabrachial nucleus nTPM: 166.2
2139
Female, age 85, right hemisphere
214.3
2790
Male, age 61, both hemispheres
211.1
2013
Male, age 80, both hemispheres
144.6
2792
Male, age 76, both hemispheres
94.6
Lateral vestibular nucleus nTPM: 154.6
2184
Male, age 76, both hemispheres
172.7
2311
Male, age 80, both hemispheres
136.4
Locus coeruleus nTPM: 342.2
2123
Female, age 91, both hemispheres
451.0
1980
Male, age 76, both hemispheres
386.5
2014
Male, age 55, unknown
353.0
2720
Male, age 74, both hemispheres
352.6
2317
Female, age 72, unknown
315.0
2162
Male, age 80, both hemispheres
286.1
2788
Male, age 74, unknown
251.2
Medial parabrachial nucleus nTPM: 172.0
2156
Male, age 61, both hemispheres
197.9
2170
Female, age 91, both hemispheres
188.7
2786
Male, age 76, both hemispheres
182.9
2854
Male, age 80, both hemispheres
165.2
2463
Female, age 85, right hemisphere
125.3
Medial periolivary nuclei nTPM: 176.9
2171
Female, age 85, both hemispheres
253.3
2063
Male, age 76, both hemispheres
233.6
2791
Male, age 74, right hemisphere
172.1
2081
Male, age 80, both hemispheres
116.2
2458
Female, age 91, both hemispheres
109.2
Motor facial nucleus nTPM: 185.2
2062
Male, age 76, both hemispheres
254.0
2365
Male, age 74, right hemisphere
197.1
2126
Male, age 61, both hemispheres
180.3
2327
Male, age 80, both hemispheres
176.0
2697
Female, age 85, both hemispheres
155.5
2795
Female, age 91, both hemispheres
148.4
Motor trigeminal nucleus nTPM: 169.1
2335
Male, age 61, both hemispheres
206.6
2079
Male, age 80, both hemispheres
181.3
2309
Male, age 76, both hemispheres
177.0
2560
Male, age 74, both hemispheres
170.9
2321
Female, age 91, both hemispheres
109.6
Nuclei of the trapezoid body nTPM: 199.3
2735
Female, age 85, both hemispheres
252.5
2159
Male, age 61, both hemispheres
229.7
1983
Male, age 76, both hemispheres
228.5
2166
Male, age 80, both hemispheres
151.4
2368
Female, age 91, both hemispheres
134.4
Nucleus raphe magnus nTPM: 211.3
2160
Male, age 61, both hemispheres
319.9
2172
Female, age 85, both hemispheres
268.2
2455
Male, age 74, both hemispheres
221.6
2051
Male, age 76, both hemispheres
169.4
2328
Male, age 80, both hemispheres
163.2
2459
Female, age 91, both hemispheres
125.4
Paramedian reticular nucleus nTPM: 205.7
2313
Male, age 61, both hemispheres
273.6
2057
Male, age 80, both hemispheres
223.9
2050
Female, age 85, both hemispheres
208.9
2052
Male, age 76, both hemispheres
116.6
Pedunculopontine tegmental nucleus nTPM: 192.1
2334
Male, age 80, both hemispheres
239.4
1921
Female, age 85, both hemispheres
201.5
2338
Male, age 61, both hemispheres
135.4
Pontine nuclei nTPM: 192.3
2787
Female, age 85, both hemispheres
301.7
2727
Male, age 61, right hemisphere
254.3
1968
Male, age 76, left hemisphere
215.9
1863
Male, age 55, unknown
205.6
2109
Female, age 72, unknown
189.1
2454
Male, age 74, left hemisphere
138.9
2115
Male, age 80, left hemisphere
132.0
2319
Female, age 91, both hemispheres
100.7
Pontine raphe nucleus nTPM: 233.6
2122
Female, age 85, midline
238.4
2853
Male, age 76, midline
228.9
Posteroventral cochlear nucleus nTPM: 136.1
2752
Female, age 85, both hemispheres
219.8
2070
Male, age 76, both hemispheres
181.0
2371
Male, age 61, both hemispheres
152.0
2135
Female, age 91, both hemispheres
64.2
2341
Male, age 80, both hemispheres
63.4
Principal sensory trigeminal nucleus nTPM: 179.2
2158
Male, age 61, both hemispheres
261.2
2008
Male, age 80, left hemisphere
193.4
2324
Male, age 76, both hemispheres
162.8
2367
Female, age 91, left hemisphere
99.5
Reticular pontine nucleus, caudal nTPM: 148.4
2332
Male, age 80, right hemisphere
182.9
2092
Male, age 76, both hemispheres
178.7
2559
Male, age 74, both hemispheres
120.4
2457
Female, age 91, both hemispheres
111.5
Reticular pontine nucleus, oral nTPM: 156.7
2012
Female, age 85, both hemispheres
190.9
1939
Male, age 80, both hemispheres
166.9
2361
Male, age 74, both hemispheres
164.5
2167
Male, age 76, both hemispheres
161.6
2366
Female, age 91, both hemispheres
99.5
Reticulotegmental nucleus nTPM: 170.1
2325
Male, age 76, both hemispheres
220.3
2452
Male, age 74, both hemispheres
168.5
2333
Male, age 80, both hemispheres
152.5
2322
Female, age 91, both hemispheres
139.0
Spinal trigeminal nucleus, oral nTPM: 167.7
1978
Male, age 76, both hemispheres
182.5
2737
Female, age 85, both hemispheres
171.8
2164
Male, age 80, both hemispheres
148.8
Subcoeruleus area nTPM: 197.3
2323
Female, age 91, left hemisphere
283.7
1958
Male, age 80, both hemispheres
203.4
2089
Male, age 76, left hemisphere
187.7
2451
Male, age 74, both hemispheres
186.9
2369
Female, age 85, left hemisphere
124.9
Superior olive nTPM: 163.7
1875
Female, age 85, both hemispheres
211.0
2364
Male, age 74, right hemisphere
174.0
2020
Male, age 76, both hemispheres
158.2
2329
Male, age 80, right hemisphere
146.0
2561
Female, age 91, both hemispheres
129.4
Ventral periolivary nuclei nTPM: 180.5
2130
Female, age 85, both hemispheres
247.4
2165
Male, age 80, both hemispheres
197.3
2023
Male, age 76, both hemispheres
151.2
2794
Female, age 91, left hemisphere
126.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 170.1
2449
Male, age 74, both hemispheres
206.4
2359
Male, age 61, both hemispheres
205.3
1959
Male, age 76, both hemispheres
176.8
2840
Female, age 85, both hemispheres
167.3
2161
Male, age 80, both hemispheres
150.5
2456
Female, age 91, both hemispheres
114.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
204.1
Pig sample
Sample description
nTPM
Pons nTPM: 204.2
Samples: 4
Max nTPM: 228.2
Min nTPM: 164.3
Sample A
Female
205.5
Sample B
Female
218.6
Sample C
Male
228.2
Sample D
Male
164.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
