HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:14.5 nTPM
HPA Brain:22.5 nTPM
GTEx:14.5 nTPM
FANTOM5:32.7 Scaled Tags Per Million
Pig:6.0 nTPM
Mouse:0.0 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027144Antibody HPA031442
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.5
Sample id Sample description nTPM
Hippocampus
nTPM: 21.3
2529 Female, age 94, left hemisphere 28.8
2148 Female, age 91, left hemisphere 25.0
1855 Male, age 76, left hemisphere 19.8
1898 Male, age 80, left hemisphere 18.4
2621 Female, age 67, right hemisphere 18.3
1911 Female, age 85, right hemisphere 17.3
Dentate gyrus
nTPM: 18.3
2528 Male, age 74, both hemispheres 21.2
2530 Female, age 94, left hemisphere 20.5
2246 Female, age 85, both hemispheres 19.7
2531 Female, age 67, both hemispheres 18.6
1927 Female, age 91, both hemispheres 16.2
2010 Male, age 76, both hemispheres 13.7
Entorhinal gyrus
nTPM: 20.4
2117 Female, age 91, right hemisphere 25.9
1787 Male, age 76, left hemisphere 20.0
2764 Male, age 80, right hemisphere 19.8
1938 Female, age 85, left hemisphere 19.6
2613 Female, age 94, left hemisphere 19.3
2686 Male, age 75, right hemisphere 17.9
Hippocampus, CA1
nTPM: 16.3
2527 Male, age 74, both hemispheres 19.3
2045 Male, age 76, both hemispheres 18.3
2082 Female, age 91, right hemisphere 17.9
1873 Female, age 85, both hemispheres 13.7
2749 Male, age 80, left hemisphere 12.6
Hippocampus, CA2
nTPM: 18.5
1940 Female, age 85, left hemisphere 22.5
2249 Male, age 74, both hemispheres 20.9
2437 Female, age 94, left hemisphere 20.7
2113 Female, age 91, right hemisphere 18.1
1963 Male, age 80, left hemisphere 14.9
1892 Male, age 76, both hemispheres 13.8
Hippocampus, CA3
nTPM: 17.8
2436 Male, age 74, both hemispheres 28.1
2620 Female, age 94, left hemisphere 18.8
2861 Female, age 67, both hemispheres 18.8
1891 Female, age 85, both hemispheres 14.2
1867 Male, age 76, both hemispheres 13.5
2137 Male, age 80, left hemisphere 13.3
Parahippocampal cortex
nTPM: 21.8
2622 Female, age 67, right hemisphere 31.5
1933 Female, age 85, both hemispheres 25.3
2692 Male, age 74, both hemispheres 23.9
2245 Female, age 91, both hemispheres 22.5
2250 Female, age 67, right hemisphere 22.2
1850 Male, age 80, both hemispheres 20.7
2693 Female, age 94, both hemispheres 20.1
2532 Female, age 72, left hemisphere 19.9
1990 Female, age 91, right hemisphere 17.5
2018 Male, age 76, both hemispheres 14.8
Perirhinal gyrus
nTPM: 22.5
1841 Female, age 85, right hemisphere 26.4
1794 Male, age 80, right hemisphere 24.1
1847 Female, age 91, left hemisphere 22.4
2521 Female, age 94, right hemisphere 21.5
2848 Male, age 76, right hemisphere 18.4
Subiculum
nTPM: 18.8
2729 Female, age 91, right hemisphere 24.6
2619 Male, age 74, both hemispheres 22.5
2438 Female, age 94, left hemisphere 21.3
1977 Female, age 85, both hemispheres 17.9
1901 Male, age 80, both hemispheres 16.2
2042 Male, age 76, both hemispheres 10.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.5
Samples: 197

Max nTPM: 39.7
Min nTPM: 4.6
Std nTPM: 6.0
Median nTPM: 13.6
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 39.7
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 34.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 34.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 33.1
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 32.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 29.6
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 29.5
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 29.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 25.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 25.6
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 25.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.7
FF:10153-102I9 76 years, female 33.2
FF:10169-103B7 60 years, female 32.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.0
Pig sample Sample description nTPM
Subiculum
nTPM: 4.5
Samples: 4

Max nTPM: 5.9
Min nTPM: 3.2
Sample A Female 5.9
Sample B Female 4.1
Sample C Male 4.7
Sample D Male 3.2
Dorsal hippocampus
nTPM: 3.4
Samples: 4

Max nTPM: 4.5
Min nTPM: 2.0
Sample A Female 4.5
Sample B Female 2.9
Sample C Male 4.0
Sample D Male 2.0
Entorhinal cortex
nTPM: 6.0
Samples: 4

Max nTPM: 6.1
Min nTPM: 5.8
Sample A Female 6.1
Sample B Female 6.0
Sample C Male 6.0
Sample D Male 5.8
Ventral hippocampus
nTPM: 4.8
Samples: 4

Max nTPM: 7.3
Min nTPM: 3.5
Sample A Female 4.7
Sample B Female 3.5
Sample C Male 7.3
Sample D Male 3.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0
Hippocampal formation
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
69113787 Antisense, RP_050316_02_G07, Mouse strain C57BL/6J (56 days, male) 0.7

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