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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
210.6
nTPM
FANTOM5:
236.1
Scaled Tags Per Million
Pig:
166.8
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
210.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 83.7
2301
Female, age 85, both hemispheres
113.0
1984
Male, age 76, both hemispheres
93.6
2188
Female, age 91, both hemispheres
76.1
2090
Male, age 80, both hemispheres
52.2
Dorsal cochlear nucleus nTPM: 77.3
2370
Male, age 61, both hemispheres
99.8
2187
Female, age 91, both hemispheres
96.5
2058
Male, age 76, both hemispheres
89.8
2378
Male, age 80, both hemispheres
55.4
2802
Male, age 74, right hemisphere
45.2
Dorsal tegmental nucleus nTPM: 96.7
2358
Male, age 61, both hemispheres
126.5
2083
Male, age 80, both hemispheres
107.6
1936
Male, age 76, left hemisphere
93.8
2326
Male, age 74, both hemispheres
59.1
Dorsolateral tegmental area nTPM: 82.9
2141
Male, age 76, both hemispheres
133.1
2654
Male, age 80, both hemispheres
100.5
2751
Female, age 85, both hemispheres
74.5
2360
Male, age 74, both hemispheres
64.4
2337
Male, age 61, both hemispheres
41.9
Kolliker-Fuse nucleus nTPM: 109.9
2793
Female, age 91, left hemisphere
141.9
2163
Male, age 80, both hemispheres
135.3
2315
Male, age 76, right hemisphere
52.7
Lateral lemniscal nuclei nTPM: 165.7
2453
Male, age 74, right hemisphere
193.5
2169
Male, age 76, both hemispheres
190.8
2036
Male, age 80, both hemispheres
167.9
2746
Female, age 85, left hemisphere
147.2
2320
Female, age 91, left hemisphere
129.1
Lateral parabrachial nucleus nTPM: 107.5
2139
Female, age 85, right hemisphere
169.1
2790
Male, age 61, both hemispheres
135.3
2013
Male, age 80, both hemispheres
91.2
2792
Male, age 76, both hemispheres
34.4
Lateral vestibular nucleus nTPM: 121.4
2184
Male, age 76, both hemispheres
144.0
2311
Male, age 80, both hemispheres
98.8
Locus coeruleus nTPM: 174.3
2720
Male, age 74, both hemispheres
236.0
2123
Female, age 91, both hemispheres
192.6
2162
Male, age 80, both hemispheres
168.7
1980
Male, age 76, both hemispheres
168.5
2014
Male, age 55, unknown
154.3
2788
Male, age 74, unknown
150.5
2317
Female, age 72, unknown
149.4
Medial parabrachial nucleus nTPM: 114.3
2156
Male, age 61, both hemispheres
154.6
2854
Male, age 80, both hemispheres
137.3
2786
Male, age 76, both hemispheres
116.4
2170
Female, age 91, both hemispheres
93.6
2463
Female, age 85, right hemisphere
69.6
Medial periolivary nuclei nTPM: 143.1
2171
Female, age 85, both hemispheres
258.1
2063
Male, age 76, both hemispheres
163.2
2791
Male, age 74, right hemisphere
114.2
2458
Female, age 91, both hemispheres
106.8
2081
Male, age 80, both hemispheres
73.2
Motor facial nucleus nTPM: 161.8
2697
Female, age 85, both hemispheres
200.6
2327
Male, age 80, both hemispheres
196.5
2365
Male, age 74, right hemisphere
184.0
2062
Male, age 76, both hemispheres
180.9
2795
Female, age 91, both hemispheres
114.6
2126
Male, age 61, both hemispheres
93.9
Motor trigeminal nucleus nTPM: 123.4
2335
Male, age 61, both hemispheres
149.8
2079
Male, age 80, both hemispheres
132.1
2560
Male, age 74, both hemispheres
127.0
2309
Male, age 76, both hemispheres
109.7
2321
Female, age 91, both hemispheres
98.4
Nuclei of the trapezoid body nTPM: 174.1
2735
Female, age 85, both hemispheres
234.4
2159
Male, age 61, both hemispheres
222.0
1983
Male, age 76, both hemispheres
162.8
2166
Male, age 80, both hemispheres
129.4
2368
Female, age 91, both hemispheres
122.1
Nucleus raphe magnus nTPM: 210.6
2172
Female, age 85, both hemispheres
311.4
2160
Male, age 61, both hemispheres
303.2
2455
Male, age 74, both hemispheres
221.8
2328
Male, age 80, both hemispheres
167.1
2051
Male, age 76, both hemispheres
142.1
2459
Female, age 91, both hemispheres
118.1
Paramedian reticular nucleus nTPM: 120.8
2050
Female, age 85, both hemispheres
158.9
2313
Male, age 61, both hemispheres
155.0
2057
Male, age 80, both hemispheres
106.2
2052
Male, age 76, both hemispheres
63.1
Pedunculopontine tegmental nucleus nTPM: 117.6
1921
Female, age 85, both hemispheres
127.0
2334
Male, age 80, both hemispheres
120.3
2338
Male, age 61, both hemispheres
105.4
Pontine nuclei nTPM: 154.6
2787
Female, age 85, both hemispheres
290.9
2727
Male, age 61, right hemisphere
186.1
1863
Male, age 55, unknown
176.1
1968
Male, age 76, left hemisphere
160.3
2109
Female, age 72, unknown
155.2
2454
Male, age 74, left hemisphere
99.6
2115
Male, age 80, left hemisphere
92.4
2319
Female, age 91, both hemispheres
76.0
Pontine raphe nucleus nTPM: 148.4
2122
Female, age 85, midline
153.5
2853
Male, age 76, midline
143.2
Posteroventral cochlear nucleus nTPM: 69.4
2752
Female, age 85, both hemispheres
139.1
2070
Male, age 76, both hemispheres
94.3
2371
Male, age 61, both hemispheres
81.0
2341
Male, age 80, both hemispheres
23.7
2135
Female, age 91, both hemispheres
8.7
Principal sensory trigeminal nucleus nTPM: 156.7
2158
Male, age 61, both hemispheres
246.9
2008
Male, age 80, left hemisphere
148.3
2324
Male, age 76, both hemispheres
127.6
2367
Female, age 91, left hemisphere
104.1
Reticular pontine nucleus, caudal nTPM: 122.7
2332
Male, age 80, right hemisphere
196.9
2092
Male, age 76, both hemispheres
114.6
2457
Female, age 91, both hemispheres
107.7
2559
Male, age 74, both hemispheres
71.6
Reticular pontine nucleus, oral nTPM: 125.7
2361
Male, age 74, both hemispheres
189.5
2012
Female, age 85, both hemispheres
142.0
2167
Male, age 76, both hemispheres
107.9
2366
Female, age 91, both hemispheres
101.8
1939
Male, age 80, both hemispheres
87.3
Reticulotegmental nucleus nTPM: 120.2
2325
Male, age 76, both hemispheres
155.7
2333
Male, age 80, both hemispheres
115.7
2452
Male, age 74, both hemispheres
106.5
2322
Female, age 91, both hemispheres
103.0
Spinal trigeminal nucleus, oral nTPM: 133.5
1978
Male, age 76, both hemispheres
147.8
2164
Male, age 80, both hemispheres
127.2
2737
Female, age 85, both hemispheres
125.7
Subcoeruleus area nTPM: 124.6
2323
Female, age 91, left hemisphere
191.9
1958
Male, age 80, both hemispheres
139.7
2089
Male, age 76, left hemisphere
138.0
2451
Male, age 74, both hemispheres
97.5
2369
Female, age 85, left hemisphere
55.7
Superior olive nTPM: 146.6
1875
Female, age 85, both hemispheres
193.3
2561
Female, age 91, both hemispheres
149.7
2329
Male, age 80, right hemisphere
148.8
2364
Male, age 74, right hemisphere
127.0
2020
Male, age 76, both hemispheres
114.3
Ventral periolivary nuclei nTPM: 163.7
2165
Male, age 80, both hemispheres
199.3
2130
Female, age 85, both hemispheres
193.4
2794
Female, age 91, left hemisphere
166.5
2023
Male, age 76, both hemispheres
95.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 138.0
2449
Male, age 74, both hemispheres
199.3
2840
Female, age 85, both hemispheres
150.5
1959
Male, age 76, both hemispheres
145.3
2161
Male, age 80, both hemispheres
140.4
2359
Male, age 61, both hemispheres
114.1
2456
Female, age 91, both hemispheres
78.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
