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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
39.5
nTPM
Monaco:
188.7
nTPM
Schmiedel:
93.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
39.5
HPA sample
nTPM
gdT-cell nTPM: 39.5
Samples: 6
Max nTPM: 49.8
Min nTPM: 25.3
P10809_1007
49.8
P10809_1022
44.4
P10809_1041
37.7
P10809_1060
25.3
P10809_1077
39.7
P10809_1098
40.2
MAIT T-cell nTPM: 31.0
Samples: 6
Max nTPM: 49.0
Min nTPM: 23.2
P10809_1006
49.0
P10809_1024
27.8
P10809_1043
23.2
P10809_1062
30.8
P10809_1083
31.5
P10809_1097
23.9
Memory CD4 T-cell nTPM: 30.8
Samples: 6
Max nTPM: 43.2
Min nTPM: 24.3
P10809_1014
43.2
P10809_1026
24.3
P10809_1045
32.0
P10809_1064
26.9
P10809_1086
26.3
P10809_1113
32.2
Memory CD8 T-cell nTPM: 35.7
Samples: 5
Max nTPM: 52.4
Min nTPM: 23.1
P10809_1012
52.4
P10809_1027
31.2
P10809_1046
47.7
P10809_1065
23.1
P10809_1111
24.3
Naive CD4 T-cell nTPM: 17.6
Samples: 6
Max nTPM: 28.5
Min nTPM: 10.2
P10809_1015
28.5
P10809_1030
10.8
P10809_1049
10.2
P10809_1068
15.7
P10809_1085
19.9
P10809_1112
20.5
Naive CD8 T-cell nTPM: 25.0
Samples: 6
Max nTPM: 27.4
Min nTPM: 19.8
P10809_1016
27.4
P10809_1031
19.8
P10809_1050
25.8
P10809_1069
23.9
P10809_1087
25.6
P10809_1110
27.2
T-reg nTPM: 36.0
Samples: 6
Max nTPM: 60.2
Min nTPM: 22.5
P10809_1018
60.2
P10809_1037
29.6
P10809_1056
23.5
P10809_1075
46.5
P10809_1094
33.7
P10809_1106
22.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
188.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 136.5
Samples: 4
Max nTPM: 157.2
Min nTPM: 119.5
RHH5202_R3573
119.5
RHH5230_R3602
157.2
RHH5259_R3631
124.7
RHH5288_R3660
144.6
Effector memory CD8 T-cell nTPM: 180.0
Samples: 4
Max nTPM: 192.5
Min nTPM: 165.8
RHH5203_R3574
165.8
RHH5231_R3603
182.2
RHH5260_R3632
179.4
RHH5289_R3661
192.5
MAIT T-cell nTPM: 124.8
Samples: 4
Max nTPM: 170.9
Min nTPM: 95.5
RHH5233_R3605
115.5
RHH5205_R3576
170.9
RHH5262_R3634
95.5
RHH5297_R3663
117.1
Memory CD4 T-cell TFH nTPM: 128.6
Samples: 4
Max nTPM: 138.0
Min nTPM: 117.8
RHH5300_R3666
138.0
RHH5236_R3608
122.3
RHH5265_R3637
117.8
RHH5208_R3579
136.2
Memory CD4 T-cell Th1 nTPM: 133.3
Samples: 4
Max nTPM: 161.6
Min nTPM: 116.5
RHH5210_R3581
138.6
RHH5302_R3668
116.5
RHH5238_R3610
161.6
RHH5267_R3639
116.5
Memory CD4 T-cell Th1/Th17 nTPM: 160.1
Samples: 4
Max nTPM: 197.9
Min nTPM: 132.7
RHH5303_R3669
145.6
RHH5211_R3582
164.3
RHH5239_R3611
197.9
RHH5268_R3640
132.7
Memory CD4 T-cell Th17 nTPM: 188.7
Samples: 4
Max nTPM: 249.6
Min nTPM: 157.4
RHH5304_R3670
162.8
RHH5212_R3583
184.9
RHH5240_R3612
249.6
RHH5269_R3641
157.4
Memory CD4 T-cell Th2 nTPM: 148.6
Samples: 4
Max nTPM: 156.9
Min nTPM: 138.9
RHH5305_R3671
156.9
RHH5213_R3584
145.7
RHH5241_R3613
138.9
RHH5270_R3642
152.9
Naive CD4 T-cell nTPM: 88.3
Samples: 4
Max nTPM: 109.2
Min nTPM: 69.5
RHH5306_R3672
69.5
RHH5214_R3585
73.3
RHH5242_R3614
101.3
RHH5271_R3643
109.2
Naive CD8 T-cell nTPM: 83.9
Samples: 4
Max nTPM: 95.0
Min nTPM: 66.1
RHH5201_R3572
89.4
RHH5229_R3601
95.0
RHH5258_R3630
66.1
RHH5287_R3659
85.1
Non-Vd2 gdTCR nTPM: 182.9
Samples: 4
Max nTPM: 205.5
Min nTPM: 162.3
RHH5235_R3607
205.5
RHH5264_R3636
178.5
RHH5207_R3578
162.3
RHH5299_R3665
185.4
T-reg nTPM: 118.4
Samples: 4
Max nTPM: 132.4
Min nTPM: 106.3
RHH5301_R3667
106.3
RHH5237_R3609
123.6
RHH5266_R3638
111.2
RHH5209_R3580
132.4
Terminal effector memory CD4 T-cell nTPM: 172.2
Samples: 2
Max nTPM: 191.1
Min nTPM: 153.3
RHH5243_R3615
191.1
RHH5272_R3644
153.3
Terminal effector memory CD8 T-cell nTPM: 183.4
Samples: 4
Max nTPM: 219.6
Min nTPM: 128.0
RHH5232_R3604
219.6
RHH5204_R3575
128.0
RHH5261_R3633
198.9
RHH5296_R3662
187.2
Vd2 gdTCR nTPM: 132.6
Samples: 4
Max nTPM: 152.5
Min nTPM: 98.9
RHH5234_R3606
138.3
RHH5206_R3577
152.5
RHH5263_R3635
140.6
RHH5298_R3664
98.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
