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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
304.7
nTPM
FANTOM5:
704.3
Scaled Tags Per Million
Pig:
264.3
nTPM
Allen mouse:
19.5
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
304.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 161.5
1984
Male, age 76, both hemispheres
190.0
2188
Female, age 91, both hemispheres
162.9
2090
Male, age 80, both hemispheres
156.6
2301
Female, age 85, both hemispheres
136.7
Dorsal cochlear nucleus nTPM: 166.8
2187
Female, age 91, both hemispheres
195.5
2058
Male, age 76, both hemispheres
181.2
2802
Male, age 74, right hemisphere
156.0
2370
Male, age 61, both hemispheres
154.3
2378
Male, age 80, both hemispheres
146.9
Dorsal tegmental nucleus nTPM: 174.1
2083
Male, age 80, both hemispheres
215.4
2326
Male, age 74, both hemispheres
198.2
1936
Male, age 76, left hemisphere
169.6
2358
Male, age 61, both hemispheres
113.1
Dorsolateral tegmental area nTPM: 192.1
2751
Female, age 85, both hemispheres
230.8
2360
Male, age 74, both hemispheres
216.6
2654
Male, age 80, both hemispheres
211.1
2141
Male, age 76, both hemispheres
189.5
2337
Male, age 61, both hemispheres
112.5
Kolliker-Fuse nucleus nTPM: 186.4
2163
Male, age 80, both hemispheres
266.2
2315
Male, age 76, right hemisphere
159.1
2793
Female, age 91, left hemisphere
134.1
Lateral lemniscal nuclei nTPM: 232.0
2036
Male, age 80, both hemispheres
298.9
2169
Male, age 76, both hemispheres
292.4
2746
Female, age 85, left hemisphere
236.9
2453
Male, age 74, right hemisphere
200.7
2320
Female, age 91, left hemisphere
131.1
Lateral parabrachial nucleus nTPM: 187.3
2139
Female, age 85, right hemisphere
274.9
2013
Male, age 80, both hemispheres
210.8
2790
Male, age 61, both hemispheres
155.6
2792
Male, age 76, both hemispheres
108.0
Lateral vestibular nucleus nTPM: 200.1
2184
Male, age 76, both hemispheres
237.8
2311
Male, age 80, both hemispheres
162.4
Locus coeruleus nTPM: 274.1
2123
Female, age 91, both hemispheres
439.3
2014
Male, age 55, unknown
300.6
2720
Male, age 74, both hemispheres
266.9
2788
Male, age 74, unknown
253.1
1980
Male, age 76, both hemispheres
238.0
2317
Female, age 72, unknown
211.8
2162
Male, age 80, both hemispheres
209.3
Medial parabrachial nucleus nTPM: 201.5
2170
Female, age 91, both hemispheres
236.0
2854
Male, age 80, both hemispheres
224.1
2463
Female, age 85, right hemisphere
193.0
2786
Male, age 76, both hemispheres
179.7
2156
Male, age 61, both hemispheres
174.6
Medial periolivary nuclei nTPM: 240.3
2171
Female, age 85, both hemispheres
347.6
2063
Male, age 76, both hemispheres
326.7
2791
Male, age 74, right hemisphere
258.5
2081
Male, age 80, both hemispheres
152.2
2458
Female, age 91, both hemispheres
116.3
Motor facial nucleus nTPM: 221.4
2062
Male, age 76, both hemispheres
361.4
2365
Male, age 74, right hemisphere
247.3
2126
Male, age 61, both hemispheres
208.6
2697
Female, age 85, both hemispheres
190.3
2327
Male, age 80, both hemispheres
175.3
2795
Female, age 91, both hemispheres
145.4
Motor trigeminal nucleus nTPM: 179.6
2079
Male, age 80, both hemispheres
227.9
2309
Male, age 76, both hemispheres
189.7
2560
Male, age 74, both hemispheres
178.2
2335
Male, age 61, both hemispheres
173.8
2321
Female, age 91, both hemispheres
128.3
Nuclei of the trapezoid body nTPM: 300.8
2159
Male, age 61, both hemispheres
483.7
2735
Female, age 85, both hemispheres
363.4
1983
Male, age 76, both hemispheres
325.7
2166
Male, age 80, both hemispheres
194.7
2368
Female, age 91, both hemispheres
136.5
Nucleus raphe magnus nTPM: 292.7
2160
Male, age 61, both hemispheres
541.4
2172
Female, age 85, both hemispheres
328.8
2455
Male, age 74, both hemispheres
310.3
2051
Male, age 76, both hemispheres
232.6
2328
Male, age 80, both hemispheres
189.9
2459
Female, age 91, both hemispheres
153.3
Paramedian reticular nucleus nTPM: 279.8
2050
Female, age 85, both hemispheres
351.5
2057
Male, age 80, both hemispheres
285.6
2313
Male, age 61, both hemispheres
276.8
2052
Male, age 76, both hemispheres
205.5
Pedunculopontine tegmental nucleus nTPM: 200.3
1921
Female, age 85, both hemispheres
222.3
2334
Male, age 80, both hemispheres
203.6
2338
Male, age 61, both hemispheres
175.1
Pontine nuclei nTPM: 304.7
2727
Male, age 61, right hemisphere
560.9
1863
Male, age 55, unknown
377.2
2787
Female, age 85, both hemispheres
353.6
2109
Female, age 72, unknown
315.6
1968
Male, age 76, left hemisphere
276.2
2454
Male, age 74, left hemisphere
243.7
2115
Male, age 80, left hemisphere
158.0
2319
Female, age 91, both hemispheres
152.6
Pontine raphe nucleus nTPM: 252.6
2122
Female, age 85, midline
309.4
2853
Male, age 76, midline
195.8
Posteroventral cochlear nucleus nTPM: 185.5
2752
Female, age 85, both hemispheres
317.8
2070
Male, age 76, both hemispheres
204.0
2341
Male, age 80, both hemispheres
153.3
2371
Male, age 61, both hemispheres
152.4
2135
Female, age 91, both hemispheres
99.8
Principal sensory trigeminal nucleus nTPM: 265.8
2158
Male, age 61, both hemispheres
425.7
2008
Male, age 80, left hemisphere
311.0
2324
Male, age 76, both hemispheres
196.0
2367
Female, age 91, left hemisphere
130.7
Reticular pontine nucleus, caudal nTPM: 199.9
2092
Male, age 76, both hemispheres
252.1
2559
Male, age 74, both hemispheres
212.0
2332
Male, age 80, right hemisphere
201.8
2457
Female, age 91, both hemispheres
133.9
Reticular pontine nucleus, oral nTPM: 216.6
2012
Female, age 85, both hemispheres
278.8
2361
Male, age 74, both hemispheres
239.7
1939
Male, age 80, both hemispheres
239.4
2167
Male, age 76, both hemispheres
201.6
2366
Female, age 91, both hemispheres
123.2
Reticulotegmental nucleus nTPM: 193.2
2325
Male, age 76, both hemispheres
242.2
2452
Male, age 74, both hemispheres
181.8
2333
Male, age 80, both hemispheres
180.4
2322
Female, age 91, both hemispheres
168.3
Spinal trigeminal nucleus, oral nTPM: 219.7
2737
Female, age 85, both hemispheres
268.2
2164
Male, age 80, both hemispheres
208.5
1978
Male, age 76, both hemispheres
182.5
Subcoeruleus area nTPM: 216.5
2323
Female, age 91, left hemisphere
269.5
1958
Male, age 80, both hemispheres
246.7
2089
Male, age 76, left hemisphere
195.0
2369
Female, age 85, left hemisphere
188.8
2451
Male, age 74, both hemispheres
182.3
Superior olive nTPM: 237.2
1875
Female, age 85, both hemispheres
341.9
2364
Male, age 74, right hemisphere
292.9
2020
Male, age 76, both hemispheres
242.8
2329
Male, age 80, right hemisphere
170.1
2561
Female, age 91, both hemispheres
138.3
Ventral periolivary nuclei nTPM: 235.5
2165
Male, age 80, both hemispheres
272.6
2130
Female, age 85, both hemispheres
264.3
2023
Male, age 76, both hemispheres
249.0
2794
Female, age 91, left hemisphere
156.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 197.6
2449
Male, age 74, both hemispheres
256.8
2840
Female, age 85, both hemispheres
235.8
1959
Male, age 76, both hemispheres
233.5
2161
Male, age 80, both hemispheres
182.9
2359
Male, age 61, both hemispheres
172.3
2456
Female, age 91, both hemispheres
104.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
264.3
Pig sample
Sample description
nTPM
Pons nTPM: 264.3
Samples: 4
Max nTPM: 327.8
Min nTPM: 222.3
Sample A
Female
255.1
Sample B
Female
222.3
Sample C
Male
252.1
Sample D
Male
327.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
