HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:22.8 nTPM
HPA Brain:27.1 nTPM
GTEx:22.8 nTPM
FANTOM5:18.0 Scaled Tags Per Million
Pig:31.3 nTPM
Mouse:10.1 nTPM
Allen mouse:4.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031231Antibody HPA031232Antibody HPA031233
Glial cells Not detectedNot detectedNot detected
Neuronal cells LowMediumLow







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 27.1
Sample id Sample description nTPM
Hippocampus
nTPM: 21.7
1898 Male, age 80, left hemisphere 24.2
1855 Male, age 76, left hemisphere 24.1
2148 Female, age 91, left hemisphere 23.7
2529 Female, age 94, left hemisphere 20.8
1911 Female, age 85, right hemisphere 18.7
2621 Female, age 67, right hemisphere 18.7
Dentate gyrus
nTPM: 21.8
1927 Female, age 91, both hemispheres 27.0
2010 Male, age 76, both hemispheres 23.3
2528 Male, age 74, both hemispheres 21.8
2531 Female, age 67, both hemispheres 21.3
2246 Female, age 85, both hemispheres 20.5
2530 Female, age 94, left hemisphere 17.1
Entorhinal gyrus
nTPM: 24.6
1938 Female, age 85, left hemisphere 29.2
2764 Male, age 80, right hemisphere 27.2
1787 Male, age 76, left hemisphere 25.8
2613 Female, age 94, left hemisphere 25.6
2117 Female, age 91, right hemisphere 19.9
2686 Male, age 75, right hemisphere 19.9
Hippocampus, CA1
nTPM: 25.1
2749 Male, age 80, left hemisphere 32.1
2527 Male, age 74, both hemispheres 25.2
2045 Male, age 76, both hemispheres 24.3
1873 Female, age 85, both hemispheres 23.7
2082 Female, age 91, right hemisphere 20.4
Hippocampus, CA2
nTPM: 22.8
1892 Male, age 76, both hemispheres 29.6
1963 Male, age 80, left hemisphere 26.9
2113 Female, age 91, right hemisphere 21.5
2437 Female, age 94, left hemisphere 20.1
1940 Female, age 85, left hemisphere 19.7
2249 Male, age 74, both hemispheres 19.1
Hippocampus, CA3
nTPM: 22.8
2137 Male, age 80, left hemisphere 28.6
1867 Male, age 76, both hemispheres 25.8
2620 Female, age 94, left hemisphere 22.5
2436 Male, age 74, both hemispheres 21.6
1891 Female, age 85, both hemispheres 20.0
2861 Female, age 67, both hemispheres 18.6
Parahippocampal cortex
nTPM: 23.2
1933 Female, age 85, both hemispheres 27.9
2245 Female, age 91, both hemispheres 25.5
1850 Male, age 80, both hemispheres 25.4
1990 Female, age 91, right hemisphere 25.0
2693 Female, age 94, both hemispheres 23.5
2250 Female, age 67, right hemisphere 22.7
2018 Male, age 76, both hemispheres 22.1
2532 Female, age 72, left hemisphere 22.1
2622 Female, age 67, right hemisphere 19.2
2692 Male, age 74, both hemispheres 18.6
Perirhinal gyrus
nTPM: 27.1
1847 Female, age 91, left hemisphere 30.4
1841 Female, age 85, right hemisphere 26.7
1794 Male, age 80, right hemisphere 26.6
2848 Male, age 76, right hemisphere 26.5
2521 Female, age 94, right hemisphere 25.4
Subiculum
nTPM: 21.1
1977 Female, age 85, both hemispheres 27.4
2729 Female, age 91, right hemisphere 23.2
1901 Male, age 80, both hemispheres 21.2
2619 Male, age 74, both hemispheres 19.5
2438 Female, age 94, left hemisphere 17.9
2042 Male, age 76, both hemispheres 17.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.8
Samples: 197

Max nTPM: 44.6
Min nTPM: 9.1
Std nTPM: 6.1
Median nTPM: 22.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 44.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 39.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 38.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 36.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 36.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 35.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 35.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 34.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 33.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 33.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 33.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.0
FF:10153-102I9 76 years, female 20.5
FF:10169-103B7 60 years, female 15.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.3
Pig sample Sample description nTPM
Subiculum
nTPM: 27.5
Samples: 4

Max nTPM: 36.7
Min nTPM: 23.2
Sample A Female 36.7
Sample B Female 25.8
Sample C Male 24.1
Sample D Male 23.2
Dorsal hippocampus
nTPM: 31.3
Samples: 4

Max nTPM: 40.6
Min nTPM: 22.4
Sample A Female 40.6
Sample B Female 33.2
Sample C Male 28.8
Sample D Male 22.4
Entorhinal cortex
nTPM: 31.3
Samples: 4

Max nTPM: 38.7
Min nTPM: 22.4
Sample A Female 28.1
Sample B Female 35.9
Sample C Male 38.7
Sample D Male 22.4
Ventral hippocampus
nTPM: 29.4
Samples: 4

Max nTPM: 34.6
Min nTPM: 24.5
Sample A Female 31.4
Sample B Female 24.5
Sample C Male 34.6
Sample D Male 27.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.0
Samples: 4

Max nTPM: 10.5
Min nTPM: 9.3
Sample A Male 9.3
Sample B Male 10.5
Sample C Female 10.3
Sample D Female 9.8
Hippocampal formation
nTPM: 10.1
Samples: 4

Max nTPM: 10.7
Min nTPM: 9.5
Sample A Male 10.6
Sample B Male 10.7
Sample C Female 9.7
Sample D Female 9.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
68637635 Antisense, RP_050126_01_C09, Mouse strain C57BL/6J (56 days, male) 4.6

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