HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:25.3 nTPM
HPA Brain:99.5 nTPM
GTEx:25.3 nTPM
FANTOM5:55.7 Scaled Tags Per Million
Pig:25.6 nTPM
Mouse:16.5 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007522
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 99.5
Sample id Sample description nTPM
Hippocampus
nTPM: 86.8
2621 Female, age 67, right hemisphere 98.6
1855 Male, age 76, left hemisphere 95.6
1898 Male, age 80, left hemisphere 84.9
2148 Female, age 91, left hemisphere 83.8
1911 Female, age 85, right hemisphere 82.0
2529 Female, age 94, left hemisphere 76.0
Dentate gyrus
nTPM: 86.5
2530 Female, age 94, left hemisphere 93.1
2010 Male, age 76, both hemispheres 87.6
2246 Female, age 85, both hemispheres 86.6
1927 Female, age 91, both hemispheres 85.3
2531 Female, age 67, both hemispheres 85.0
2528 Male, age 74, both hemispheres 81.7
Entorhinal gyrus
nTPM: 99.5
2613 Female, age 94, left hemisphere 118.1
1787 Male, age 76, left hemisphere 101.3
1938 Female, age 85, left hemisphere 100.2
2764 Male, age 80, right hemisphere 99.8
2686 Male, age 75, right hemisphere 92.5
2117 Female, age 91, right hemisphere 85.1
Hippocampus, CA1
nTPM: 81.6
2082 Female, age 91, right hemisphere 88.3
2749 Male, age 80, left hemisphere 83.1
2527 Male, age 74, both hemispheres 79.7
2045 Male, age 76, both hemispheres 79.0
1873 Female, age 85, both hemispheres 77.7
Hippocampus, CA2
nTPM: 89.1
1940 Female, age 85, left hemisphere 100.8
1892 Male, age 76, both hemispheres 95.0
2437 Female, age 94, left hemisphere 94.4
2113 Female, age 91, right hemisphere 82.1
1963 Male, age 80, left hemisphere 81.4
2249 Male, age 74, both hemispheres 81.1
Hippocampus, CA3
nTPM: 85.3
2861 Female, age 67, both hemispheres 98.2
2620 Female, age 94, left hemisphere 93.0
1891 Female, age 85, both hemispheres 85.9
2436 Male, age 74, both hemispheres 82.8
1867 Male, age 76, both hemispheres 78.8
2137 Male, age 80, left hemisphere 72.9
Parahippocampal cortex
nTPM: 88.5
2622 Female, age 67, right hemisphere 108.3
2692 Male, age 74, both hemispheres 94.1
1933 Female, age 85, both hemispheres 93.1
1850 Male, age 80, both hemispheres 90.1
2693 Female, age 94, both hemispheres 89.5
2018 Male, age 76, both hemispheres 86.3
2532 Female, age 72, left hemisphere 85.4
2245 Female, age 91, both hemispheres 82.6
1990 Female, age 91, right hemisphere 79.9
2250 Female, age 67, right hemisphere 75.5
Perirhinal gyrus
nTPM: 94.5
2848 Male, age 76, right hemisphere 100.7
2521 Female, age 94, right hemisphere 97.4
1794 Male, age 80, right hemisphere 96.8
1847 Female, age 91, left hemisphere 91.1
1841 Female, age 85, right hemisphere 86.3
Subiculum
nTPM: 88.3
2438 Female, age 94, left hemisphere 102.3
2619 Male, age 74, both hemispheres 89.3
1901 Male, age 80, both hemispheres 87.5
2042 Male, age 76, both hemispheres 86.6
1977 Female, age 85, both hemispheres 85.8
2729 Female, age 91, right hemisphere 78.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.3
Samples: 197

Max nTPM: 51.8
Min nTPM: 13.4
Std nTPM: 6.0
Median nTPM: 24.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 51.8
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 46.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 46.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 45.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 41.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 38.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 38.0
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 37.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 36.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 36.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 35.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.7
FF:10153-102I9 76 years, female 65.7
FF:10169-103B7 60 years, female 45.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.6
Pig sample Sample description nTPM
Subiculum
nTPM: 22.7
Samples: 4

Max nTPM: 26.3
Min nTPM: 20.1
Sample A Female 26.3
Sample B Female 20.9
Sample C Male 23.6
Sample D Male 20.1
Dorsal hippocampus
nTPM: 25.0
Samples: 4

Max nTPM: 30.9
Min nTPM: 17.9
Sample A Female 30.9
Sample B Female 26.4
Sample C Male 24.8
Sample D Male 17.9
Entorhinal cortex
nTPM: 23.0
Samples: 4

Max nTPM: 25.9
Min nTPM: 20.7
Sample A Female 23.1
Sample B Female 22.3
Sample C Male 25.9
Sample D Male 20.7
Ventral hippocampus
nTPM: 25.6
Samples: 4

Max nTPM: 32.4
Min nTPM: 17.2
Sample A Female 23.6
Sample B Female 17.2
Sample C Male 32.4
Sample D Male 29.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.1
Samples: 4

Max nTPM: 16.6
Min nTPM: 12.2
Sample A Male 16.2
Sample B Male 12.2
Sample C Female 15.2
Sample D Female 16.6
Hippocampal formation
nTPM: 16.5
Samples: 4

Max nTPM: 17.7
Min nTPM: 14.8
Sample A Male 14.8
Sample B Male 17.7
Sample C Female 16.8
Sample D Female 16.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
71280688 Antisense, RP_050818_01_D05, Mouse strain C57BL/6J (56 days, male) 2.4

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