HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:66.3 nTPM
HPA Brain:96.9 nTPM
GTEx:66.3 nTPM
FANTOM5:148.8 Scaled Tags Per Million
Pig:80.6 nTPM
Mouse:229.6 nTPM
Allen mouse:12.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023421Antibody CAB009532
Glial cells MediumHigh
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 96.9
Sample id Sample description nTPM
Hippocampus
nTPM: 70.0
1898 Male, age 80, left hemisphere 110.3
1855 Male, age 76, left hemisphere 68.2
1911 Female, age 85, right hemisphere 65.0
2621 Female, age 67, right hemisphere 62.7
2148 Female, age 91, left hemisphere 60.1
2529 Female, age 94, left hemisphere 53.8
Dentate gyrus
nTPM: 75.8
1927 Female, age 91, both hemispheres 125.8
2010 Male, age 76, both hemispheres 74.1
2246 Female, age 85, both hemispheres 72.5
2531 Female, age 67, both hemispheres 71.6
2528 Male, age 74, both hemispheres 69.6
2530 Female, age 94, left hemisphere 41.1
Entorhinal gyrus
nTPM: 45.7
2764 Male, age 80, right hemisphere 55.6
1938 Female, age 85, left hemisphere 55.5
1787 Male, age 76, left hemisphere 51.9
2117 Female, age 91, right hemisphere 41.8
2613 Female, age 94, left hemisphere 37.7
2686 Male, age 75, right hemisphere 32.0
Hippocampus, CA1
nTPM: 96.9
2749 Male, age 80, left hemisphere 153.9
2045 Male, age 76, both hemispheres 91.8
2082 Female, age 91, right hemisphere 87.3
1873 Female, age 85, both hemispheres 79.5
2527 Male, age 74, both hemispheres 72.2
Hippocampus, CA2
nTPM: 76.6
1892 Male, age 76, both hemispheres 106.0
1963 Male, age 80, left hemisphere 92.8
1940 Female, age 85, left hemisphere 83.1
2113 Female, age 91, right hemisphere 73.1
2249 Male, age 74, both hemispheres 66.6
2437 Female, age 94, left hemisphere 38.2
Hippocampus, CA3
nTPM: 84.5
2137 Male, age 80, left hemisphere 152.1
1867 Male, age 76, both hemispheres 81.5
2436 Male, age 74, both hemispheres 81.4
2620 Female, age 94, left hemisphere 77.9
1891 Female, age 85, both hemispheres 62.0
2861 Female, age 67, both hemispheres 52.1
Parahippocampal cortex
nTPM: 60.6
2250 Female, age 67, right hemisphere 84.0
2245 Female, age 91, both hemispheres 78.6
1850 Male, age 80, both hemispheres 78.0
1933 Female, age 85, both hemispheres 73.7
2693 Female, age 94, both hemispheres 65.5
1990 Female, age 91, right hemisphere 64.1
2018 Male, age 76, both hemispheres 61.2
2532 Female, age 72, left hemisphere 40.1
2622 Female, age 67, right hemisphere 32.8
2692 Male, age 74, both hemispheres 27.7
Perirhinal gyrus
nTPM: 92.3
1847 Female, age 91, left hemisphere 130.1
1794 Male, age 80, right hemisphere 99.5
2521 Female, age 94, right hemisphere 98.0
1841 Female, age 85, right hemisphere 77.7
2848 Male, age 76, right hemisphere 56.3
Subiculum
nTPM: 53.6
1901 Male, age 80, both hemispheres 83.3
1977 Female, age 85, both hemispheres 66.7
2729 Female, age 91, right hemisphere 52.2
2042 Male, age 76, both hemispheres 48.5
2438 Female, age 94, left hemisphere 36.5
2619 Male, age 74, both hemispheres 34.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 66.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 66.3
Samples: 197

Max nTPM: 219.7
Min nTPM: 16.7
Std nTPM: 41.7
Median nTPM: 58.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 219.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 195.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 177.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 168.2
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 167.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 162.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 159.3
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 158.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 156.9
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 152.6
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 150.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 148.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 148.8
FF:10169-103B7 60 years, female 212.9
FF:10153-102I9 76 years, female 84.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 80.6
Pig sample Sample description nTPM
Subiculum
nTPM: 58.3
Samples: 4

Max nTPM: 64.6
Min nTPM: 53.9
Sample A Female 57.4
Sample B Female 57.1
Sample C Male 64.6
Sample D Male 53.9
Dorsal hippocampus
nTPM: 80.7
Samples: 4

Max nTPM: 91.4
Min nTPM: 59.3
Sample A Female 87.0
Sample B Female 84.9
Sample C Male 91.4
Sample D Male 59.3
Entorhinal cortex
nTPM: 60.3
Samples: 4

Max nTPM: 74.8
Min nTPM: 48.7
Sample A Female 51.2
Sample B Female 74.8
Sample C Male 66.3
Sample D Male 48.7
Ventral hippocampus
nTPM: 72.5
Samples: 4

Max nTPM: 93.8
Min nTPM: 50.0
Sample A Female 66.5
Sample B Female 50.0
Sample C Male 93.8
Sample D Male 79.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 229.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 229.6
Samples: 4

Max nTPM: 242.8
Min nTPM: 209.5
Sample A Male 209.5
Sample B Male 242.8
Sample C Female 229.4
Sample D Female 236.6
Hippocampal formation
nTPM: 218.3
Samples: 4

Max nTPM: 244.6
Min nTPM: 205.3
Sample A Male 244.6
Sample B Male 205.3
Sample C Female 212.7
Sample D Female 210.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.0
70525808 Antisense, RP_050317_04_E10, Mouse strain C57BL/6J (56 days, male) 12.0

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