HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:19.7 nTPM
HPA Brain:20.6 nTPM
GTEx:19.7 nTPM
FANTOM5:22.2 Scaled Tags Per Million
Pig:14.6 nTPM
Mouse:43.1 nTPM
Allen mouse:12.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026446
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.6
Sample id Sample description nTPM
Hippocampus
nTPM: 19.2
2621 Female, age 67, right hemisphere 19.8
2148 Female, age 91, left hemisphere 19.6
1898 Male, age 80, left hemisphere 19.2
2529 Female, age 94, left hemisphere 19.1
1855 Male, age 76, left hemisphere 19.0
1911 Female, age 85, right hemisphere 18.3
Dentate gyrus
nTPM: 18.8
1927 Female, age 91, both hemispheres 20.2
2531 Female, age 67, both hemispheres 19.2
2010 Male, age 76, both hemispheres 18.7
2530 Female, age 94, left hemisphere 18.4
2528 Male, age 74, both hemispheres 18.3
2246 Female, age 85, both hemispheres 18.0
Entorhinal gyrus
nTPM: 18.6
2613 Female, age 94, left hemisphere 20.9
2764 Male, age 80, right hemisphere 20.8
1938 Female, age 85, left hemisphere 18.5
1787 Male, age 76, left hemisphere 18.3
2686 Male, age 75, right hemisphere 16.7
2117 Female, age 91, right hemisphere 16.4
Hippocampus, CA1
nTPM: 20.6
2749 Male, age 80, left hemisphere 25.9
2527 Male, age 74, both hemispheres 21.1
1873 Female, age 85, both hemispheres 20.3
2082 Female, age 91, right hemisphere 18.2
2045 Male, age 76, both hemispheres 17.6
Hippocampus, CA2
nTPM: 19.4
1963 Male, age 80, left hemisphere 21.8
1892 Male, age 76, both hemispheres 20.7
2249 Male, age 74, both hemispheres 20.3
2113 Female, age 91, right hemisphere 18.6
1940 Female, age 85, left hemisphere 18.0
2437 Female, age 94, left hemisphere 16.9
Hippocampus, CA3
nTPM: 20.5
2137 Male, age 80, left hemisphere 24.8
2620 Female, age 94, left hemisphere 20.8
1867 Male, age 76, both hemispheres 20.5
2861 Female, age 67, both hemispheres 20.5
2436 Male, age 74, both hemispheres 18.8
1891 Female, age 85, both hemispheres 17.7
Parahippocampal cortex
nTPM: 19.2
2245 Female, age 91, both hemispheres 21.3
1933 Female, age 85, both hemispheres 21.2
2250 Female, age 67, right hemisphere 19.8
1850 Male, age 80, both hemispheres 19.2
2018 Male, age 76, both hemispheres 18.8
2693 Female, age 94, both hemispheres 18.7
2532 Female, age 72, left hemisphere 18.4
1990 Female, age 91, right hemisphere 18.1
2622 Female, age 67, right hemisphere 18.1
2692 Male, age 74, both hemispheres 18.0
Perirhinal gyrus
nTPM: 20.2
1847 Female, age 91, left hemisphere 22.2
1794 Male, age 80, right hemisphere 20.8
1841 Female, age 85, right hemisphere 20.6
2521 Female, age 94, right hemisphere 19.0
2848 Male, age 76, right hemisphere 18.5
Subiculum
nTPM: 16.9
1977 Female, age 85, both hemispheres 18.8
1901 Male, age 80, both hemispheres 17.9
2729 Female, age 91, right hemisphere 17.4
2619 Male, age 74, both hemispheres 17.1
2438 Female, age 94, left hemisphere 15.5
2042 Male, age 76, both hemispheres 14.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.7
Samples: 197

Max nTPM: 41.3
Min nTPM: 7.9
Std nTPM: 5.9
Median nTPM: 19.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 41.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 37.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 36.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 33.6
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 32.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 32.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 31.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 31.7
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 31.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 30.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 29.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.2
FF:10169-103B7 60 years, female 25.9
FF:10153-102I9 76 years, female 18.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.6
Pig sample Sample description nTPM
Subiculum
nTPM: 12.3
Samples: 4

Max nTPM: 15.0
Min nTPM: 11.2
Sample A Female 15.0
Sample B Female 11.2
Sample C Male 11.7
Sample D Male 11.4
Dorsal hippocampus
nTPM: 14.6
Samples: 4

Max nTPM: 18.4
Min nTPM: 11.4
Sample A Female 18.4
Sample B Female 13.9
Sample C Male 14.5
Sample D Male 11.4
Entorhinal cortex
nTPM: 12.2
Samples: 4

Max nTPM: 14.1
Min nTPM: 11.1
Sample A Female 12.2
Sample B Female 14.1
Sample C Male 11.1
Sample D Male 11.2
Ventral hippocampus
nTPM: 14.1
Samples: 4

Max nTPM: 16.0
Min nTPM: 11.6
Sample A Female 14.8
Sample B Female 11.6
Sample C Male 16.0
Sample D Male 14.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.1
Samples: 4

Max nTPM: 43.4
Min nTPM: 36.2
Sample A Male 38.7
Sample B Male 42.0
Sample C Female 43.4
Sample D Female 36.2
Hippocampal formation
nTPM: 43.2
Samples: 4

Max nTPM: 50.2
Min nTPM: 39.0
Sample A Male 50.2
Sample B Male 40.2
Sample C Female 39.0
Sample D Female 43.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.8
512988 Antisense, RP_040809_02_F06, Mouse strain C57BL/6J (56 days, male) 23.4
81599642 Antisense, RP_071212_04_F03, Mouse strain C57BL/6J (56 days, male) 2.2

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