HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:7.3 nTPM
HPA Brain:17.2 nTPM
GTEx:7.3 nTPM
FANTOM5:17.6 Scaled Tags Per Million
Pig:10.7 nTPM
Mouse:13.6 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039197Antibody HPA039860
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.2
Sample id Sample description nTPM
Hippocampus
nTPM: 14.3
2529 Female, age 94, left hemisphere 17.6
2148 Female, age 91, left hemisphere 15.9
2621 Female, age 67, right hemisphere 14.0
1911 Female, age 85, right hemisphere 13.5
1898 Male, age 80, left hemisphere 13.4
1855 Male, age 76, left hemisphere 11.6
Dentate gyrus
nTPM: 15.5
2530 Female, age 94, left hemisphere 18.3
2531 Female, age 67, both hemispheres 17.4
2528 Male, age 74, both hemispheres 17.3
2246 Female, age 85, both hemispheres 15.9
1927 Female, age 91, both hemispheres 13.0
2010 Male, age 76, both hemispheres 11.3
Entorhinal gyrus
nTPM: 16.4
2117 Female, age 91, right hemisphere 19.7
2686 Male, age 75, right hemisphere 18.2
2613 Female, age 94, left hemisphere 16.9
2764 Male, age 80, right hemisphere 16.4
1787 Male, age 76, left hemisphere 13.8
1938 Female, age 85, left hemisphere 13.2
Hippocampus, CA1
nTPM: 12.8
2082 Female, age 91, right hemisphere 18.7
2527 Male, age 74, both hemispheres 16.1
1873 Female, age 85, both hemispheres 12.3
2045 Male, age 76, both hemispheres 8.6
2749 Male, age 80, left hemisphere 8.2
Hippocampus, CA2
nTPM: 15.3
2113 Female, age 91, right hemisphere 17.5
2437 Female, age 94, left hemisphere 17.4
2249 Male, age 74, both hemispheres 15.9
1940 Female, age 85, left hemisphere 14.6
1963 Male, age 80, left hemisphere 14.1
1892 Male, age 76, both hemispheres 12.6
Hippocampus, CA3
nTPM: 15.8
1891 Female, age 85, both hemispheres 18.4
2620 Female, age 94, left hemisphere 18.1
2436 Male, age 74, both hemispheres 16.4
2861 Female, age 67, both hemispheres 15.5
1867 Male, age 76, both hemispheres 13.4
2137 Male, age 80, left hemisphere 13.1
Parahippocampal cortex
nTPM: 15.5
2692 Male, age 74, both hemispheres 21.7
2693 Female, age 94, both hemispheres 17.2
1990 Female, age 91, right hemisphere 16.9
2532 Female, age 72, left hemisphere 16.8
2622 Female, age 67, right hemisphere 16.4
2245 Female, age 91, both hemispheres 14.9
2250 Female, age 67, right hemisphere 13.8
1850 Male, age 80, both hemispheres 12.5
2018 Male, age 76, both hemispheres 12.3
1933 Female, age 85, both hemispheres 12.1
Perirhinal gyrus
nTPM: 12.5
2521 Female, age 94, right hemisphere 14.9
2848 Male, age 76, right hemisphere 14.0
1794 Male, age 80, right hemisphere 12.3
1847 Female, age 91, left hemisphere 11.2
1841 Female, age 85, right hemisphere 10.3
Subiculum
nTPM: 17.2
2619 Male, age 74, both hemispheres 19.7
1977 Female, age 85, both hemispheres 18.7
1901 Male, age 80, both hemispheres 18.6
2729 Female, age 91, right hemisphere 16.3
2042 Male, age 76, both hemispheres 15.8
2438 Female, age 94, left hemisphere 13.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.3
Samples: 197

Max nTPM: 24.5
Min nTPM: 1.5
Std nTPM: 3.3
Median nTPM: 6.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 24.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 18.1
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 16.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 16.7
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 16.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 16.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 16.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 15.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 15.4
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 13.7
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 13.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.6
FF:10153-102I9 76 years, female 24.9
FF:10169-103B7 60 years, female 10.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.7
Pig sample Sample description nTPM
Subiculum
nTPM: 8.5
Samples: 4

Max nTPM: 10.9
Min nTPM: 6.1
Sample A Female 9.8
Sample B Female 7.0
Sample C Male 10.9
Sample D Male 6.1
Dorsal hippocampus
nTPM: 8.5
Samples: 4

Max nTPM: 10.6
Min nTPM: 6.1
Sample A Female 7.6
Sample B Female 9.6
Sample C Male 10.6
Sample D Male 6.1
Entorhinal cortex
nTPM: 10.7
Samples: 4

Max nTPM: 11.3
Min nTPM: 9.3
Sample A Female 11.3
Sample B Female 9.3
Sample C Male 11.3
Sample D Male 10.7
Ventral hippocampus
nTPM: 10.6
Samples: 4

Max nTPM: 15.3
Min nTPM: 7.9
Sample A Female 7.9
Sample B Female 8.8
Sample C Male 15.3
Sample D Male 10.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 11.0
Samples: 4

Max nTPM: 12.5
Min nTPM: 9.8
Sample A Male 10.3
Sample B Male 11.4
Sample C Female 12.5
Sample D Female 9.8
Hippocampal formation
nTPM: 13.6
Samples: 4

Max nTPM: 15.7
Min nTPM: 9.6
Sample A Male 13.5
Sample B Male 15.6
Sample C Female 9.6
Sample D Female 15.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
69816655 Antisense, RP_050510_01_E10, Mouse strain C57BL/6J (56 days, male) 0.0

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