HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:33.8 nTPM
HPA Brain:58.8 nTPM
GTEx:33.8 nTPM
FANTOM5:151.8 Scaled Tags Per Million
Pig:81.3 nTPM
Mouse:159.9 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016666
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 58.8
Sample id Sample description nTPM
Hippocampus
nTPM: 55.6
1898 Male, age 80, left hemisphere 61.5
1911 Female, age 85, right hemisphere 56.7
2529 Female, age 94, left hemisphere 55.3
1855 Male, age 76, left hemisphere 55.0
2148 Female, age 91, left hemisphere 52.8
2621 Female, age 67, right hemisphere 52.3
Dentate gyrus
nTPM: 52.1
1927 Female, age 91, both hemispheres 54.7
2246 Female, age 85, both hemispheres 54.6
2010 Male, age 76, both hemispheres 53.8
2531 Female, age 67, both hemispheres 52.7
2530 Female, age 94, left hemisphere 51.0
2528 Male, age 74, both hemispheres 45.6
Entorhinal gyrus
nTPM: 49.7
1938 Female, age 85, left hemisphere 55.0
2117 Female, age 91, right hemisphere 54.4
1787 Male, age 76, left hemisphere 51.0
2686 Male, age 75, right hemisphere 50.6
2764 Male, age 80, right hemisphere 48.1
2613 Female, age 94, left hemisphere 39.2
Hippocampus, CA1
nTPM: 58.2
2749 Male, age 80, left hemisphere 72.2
2045 Male, age 76, both hemispheres 58.7
1873 Female, age 85, both hemispheres 57.3
2527 Male, age 74, both hemispheres 55.6
2082 Female, age 91, right hemisphere 47.2
Hippocampus, CA2
nTPM: 50.6
1892 Male, age 76, both hemispheres 58.6
1963 Male, age 80, left hemisphere 53.6
2113 Female, age 91, right hemisphere 49.2
1940 Female, age 85, left hemisphere 49.0
2249 Male, age 74, both hemispheres 49.0
2437 Female, age 94, left hemisphere 44.0
Hippocampus, CA3
nTPM: 54.8
2137 Male, age 80, left hemisphere 71.6
1867 Male, age 76, both hemispheres 57.8
1891 Female, age 85, both hemispheres 54.3
2620 Female, age 94, left hemisphere 53.8
2436 Male, age 74, both hemispheres 46.4
2861 Female, age 67, both hemispheres 44.7
Parahippocampal cortex
nTPM: 50.2
1850 Male, age 80, both hemispheres 59.1
2245 Female, age 91, both hemispheres 58.5
2532 Female, age 72, left hemisphere 51.2
1933 Female, age 85, both hemispheres 50.1
2018 Male, age 76, both hemispheres 49.4
1990 Female, age 91, right hemisphere 48.1
2250 Female, age 67, right hemisphere 48.0
2693 Female, age 94, both hemispheres 47.5
2692 Male, age 74, both hemispheres 46.4
2622 Female, age 67, right hemisphere 43.3
Perirhinal gyrus
nTPM: 58.8
1794 Male, age 80, right hemisphere 66.7
1841 Female, age 85, right hemisphere 61.1
2521 Female, age 94, right hemisphere 57.7
2848 Male, age 76, right hemisphere 57.1
1847 Female, age 91, left hemisphere 51.6
Subiculum
nTPM: 50.6
1901 Male, age 80, both hemispheres 58.3
1977 Female, age 85, both hemispheres 51.8
2042 Male, age 76, both hemispheres 51.8
2438 Female, age 94, left hemisphere 50.1
2729 Female, age 91, right hemisphere 47.1
2619 Male, age 74, both hemispheres 44.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.8
Samples: 197

Max nTPM: 60.0
Min nTPM: 13.1
Std nTPM: 8.7
Median nTPM: 33.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 60.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 54.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 54.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 54.3
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 54.1
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 53.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 50.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 49.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 49.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 48.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 48.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 151.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 151.8
FF:10153-102I9 76 years, female 185.2
FF:10169-103B7 60 years, female 118.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 81.3
Pig sample Sample description nTPM
Subiculum
nTPM: 65.0
Samples: 4

Max nTPM: 79.0
Min nTPM: 59.2
Sample A Female 79.0
Sample B Female 61.5
Sample C Male 59.2
Sample D Male 60.4
Dorsal hippocampus
nTPM: 81.4
Samples: 4

Max nTPM: 92.9
Min nTPM: 74.8
Sample A Female 92.9
Sample B Female 79.6
Sample C Male 78.1
Sample D Male 74.8
Entorhinal cortex
nTPM: 67.4
Samples: 4

Max nTPM: 71.7
Min nTPM: 61.6
Sample A Female 71.7
Sample B Female 67.7
Sample C Male 68.6
Sample D Male 61.6
Ventral hippocampus
nTPM: 70.2
Samples: 4

Max nTPM: 77.1
Min nTPM: 62.3
Sample A Female 76.4
Sample B Female 64.8
Sample C Male 62.3
Sample D Male 77.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 159.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 159.9
Samples: 4

Max nTPM: 163.6
Min nTPM: 152.4
Sample A Male 161.2
Sample B Male 162.4
Sample C Female 152.4
Sample D Female 163.6
Hippocampal formation
nTPM: 158.4
Samples: 4

Max nTPM: 168.3
Min nTPM: 149.2
Sample A Male 168.3
Sample B Male 150.8
Sample C Female 165.2
Sample D Female 149.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
69134616 Antisense, RP_050321_03_B10, Mouse strain C57BL/6J (56 days, male) 2.2

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