HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:54.2 nTPM
HPA Brain:148.7 nTPM
GTEx:54.2 nTPM
FANTOM5:160.3 Scaled Tags Per Million
Pig:207.3 nTPM
Mouse:406.5 nTPM
Allen mouse:20.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020449
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 148.7
Sample id Sample description nTPM
Hippocampus
nTPM: 112.1
1898 Male, age 80, left hemisphere 162.4
1855 Male, age 76, left hemisphere 118.7
2621 Female, age 67, right hemisphere 106.5
1911 Female, age 85, right hemisphere 101.6
2148 Female, age 91, left hemisphere 100.4
2529 Female, age 94, left hemisphere 82.7
Dentate gyrus
nTPM: 111.0
1927 Female, age 91, both hemispheres 161.3
2010 Male, age 76, both hemispheres 129.0
2246 Female, age 85, both hemispheres 104.0
2528 Male, age 74, both hemispheres 93.7
2531 Female, age 67, both hemispheres 93.1
2530 Female, age 94, left hemisphere 85.0
Entorhinal gyrus
nTPM: 84.0
1938 Female, age 85, left hemisphere 108.6
2764 Male, age 80, right hemisphere 91.6
1787 Male, age 76, left hemisphere 87.3
2613 Female, age 94, left hemisphere 77.4
2117 Female, age 91, right hemisphere 71.6
2686 Male, age 75, right hemisphere 67.3
Hippocampus, CA1
nTPM: 148.7
2749 Male, age 80, left hemisphere 278.7
1873 Female, age 85, both hemispheres 150.7
2045 Male, age 76, both hemispheres 118.1
2527 Male, age 74, both hemispheres 105.1
2082 Female, age 91, right hemisphere 90.8
Hippocampus, CA2
nTPM: 112.8
1963 Male, age 80, left hemisphere 168.0
1892 Male, age 76, both hemispheres 149.7
2249 Male, age 74, both hemispheres 100.8
1940 Female, age 85, left hemisphere 94.3
2113 Female, age 91, right hemisphere 87.6
2437 Female, age 94, left hemisphere 76.1
Hippocampus, CA3
nTPM: 125.7
2137 Male, age 80, left hemisphere 225.4
1867 Male, age 76, both hemispheres 125.1
2436 Male, age 74, both hemispheres 108.5
2620 Female, age 94, left hemisphere 105.1
1891 Female, age 85, both hemispheres 99.8
2861 Female, age 67, both hemispheres 90.5
Parahippocampal cortex
nTPM: 93.1
1850 Male, age 80, both hemispheres 129.4
1933 Female, age 85, both hemispheres 102.7
2245 Female, age 91, both hemispheres 100.0
1990 Female, age 91, right hemisphere 95.9
2250 Female, age 67, right hemisphere 95.7
2018 Male, age 76, both hemispheres 95.6
2693 Female, age 94, both hemispheres 94.4
2532 Female, age 72, left hemisphere 82.7
2692 Male, age 74, both hemispheres 67.8
2622 Female, age 67, right hemisphere 67.3
Perirhinal gyrus
nTPM: 122.0
1847 Female, age 91, left hemisphere 134.2
1841 Female, age 85, right hemisphere 132.3
1794 Male, age 80, right hemisphere 132.0
2521 Female, age 94, right hemisphere 110.7
2848 Male, age 76, right hemisphere 100.7
Subiculum
nTPM: 88.4
1901 Male, age 80, both hemispheres 126.3
1977 Female, age 85, both hemispheres 99.6
2729 Female, age 91, right hemisphere 85.9
2042 Male, age 76, both hemispheres 81.3
2438 Female, age 94, left hemisphere 69.8
2619 Male, age 74, both hemispheres 67.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 54.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 54.2
Samples: 197

Max nTPM: 122.8
Min nTPM: 20.5
Std nTPM: 21.3
Median nTPM: 50.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 122.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 120.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 113.6
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 103.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 102.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 101.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 101.4
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 99.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 94.5
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 94.2
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 93.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 160.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 160.3
FF:10169-103B7 60 years, female 176.5
FF:10153-102I9 76 years, female 144.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 207.3
Pig sample Sample description nTPM
Subiculum
nTPM: 113.9
Samples: 4

Max nTPM: 139.6
Min nTPM: 100.7
Sample A Female 139.6
Sample B Female 100.7
Sample C Male 110.7
Sample D Male 104.5
Dorsal hippocampus
nTPM: 207.3
Samples: 4

Max nTPM: 264.0
Min nTPM: 159.6
Sample A Female 264.0
Sample B Female 231.1
Sample C Male 159.6
Sample D Male 174.4
Entorhinal cortex
nTPM: 124.2
Samples: 4

Max nTPM: 146.3
Min nTPM: 100.9
Sample A Female 129.3
Sample B Female 146.3
Sample C Male 120.3
Sample D Male 100.9
Ventral hippocampus
nTPM: 157.0
Samples: 4

Max nTPM: 235.9
Min nTPM: 118.6
Sample A Female 152.7
Sample B Female 120.8
Sample C Male 118.6
Sample D Male 235.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 406.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 291.3
Samples: 4

Max nTPM: 300.2
Min nTPM: 279.0
Sample A Male 287.2
Sample B Male 279.0
Sample C Female 298.9
Sample D Female 300.2
Hippocampal formation
nTPM: 406.6
Samples: 4

Max nTPM: 447.6
Min nTPM: 346.3
Sample A Male 394.6
Sample B Male 437.7
Sample C Female 447.6
Sample D Female 346.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.9
69782073 Antisense, RP_050505_02_C06, Mouse strain C57BL/6J (56 days, male) 20.9

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