HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:168.6 nTPM
HPA Brain:78.9 nTPM
GTEx:168.6 nTPM
FANTOM5:210.9 Scaled Tags Per Million
Pig:157.1 nTPM
Mouse:43.8 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051739
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 78.9
Sample id Sample description nTPM
Hippocampus
nTPM: 72.3
1898 Male, age 80, left hemisphere 82.0
2621 Female, age 67, right hemisphere 77.8
2529 Female, age 94, left hemisphere 75.7
1855 Male, age 76, left hemisphere 74.3
1911 Female, age 85, right hemisphere 67.6
2148 Female, age 91, left hemisphere 56.6
Dentate gyrus
nTPM: 61.1
1927 Female, age 91, both hemispheres 71.9
2246 Female, age 85, both hemispheres 66.4
2530 Female, age 94, left hemisphere 64.1
2010 Male, age 76, both hemispheres 61.0
2528 Male, age 74, both hemispheres 55.2
2531 Female, age 67, both hemispheres 47.8
Entorhinal gyrus
nTPM: 62.4
1938 Female, age 85, left hemisphere 85.3
1787 Male, age 76, left hemisphere 66.8
2764 Male, age 80, right hemisphere 66.6
2117 Female, age 91, right hemisphere 64.7
2613 Female, age 94, left hemisphere 46.5
2686 Male, age 75, right hemisphere 44.8
Hippocampus, CA1
nTPM: 71.0
2749 Male, age 80, left hemisphere 86.9
2527 Male, age 74, both hemispheres 77.0
1873 Female, age 85, both hemispheres 69.3
2045 Male, age 76, both hemispheres 62.0
2082 Female, age 91, right hemisphere 59.9
Hippocampus, CA2
nTPM: 70.7
2249 Male, age 74, both hemispheres 90.5
1892 Male, age 76, both hemispheres 79.9
2437 Female, age 94, left hemisphere 69.4
1963 Male, age 80, left hemisphere 69.1
1940 Female, age 85, left hemisphere 61.5
2113 Female, age 91, right hemisphere 53.9
Hippocampus, CA3
nTPM: 66.7
2436 Male, age 74, both hemispheres 95.9
2137 Male, age 80, left hemisphere 74.9
1867 Male, age 76, both hemispheres 72.6
1891 Female, age 85, both hemispheres 67.4
2620 Female, age 94, left hemisphere 50.1
2861 Female, age 67, both hemispheres 39.1
Parahippocampal cortex
nTPM: 68.0
1850 Male, age 80, both hemispheres 91.0
2250 Female, age 67, right hemisphere 76.5
2018 Male, age 76, both hemispheres 72.5
2245 Female, age 91, both hemispheres 71.0
2532 Female, age 72, left hemisphere 70.0
1933 Female, age 85, both hemispheres 68.4
1990 Female, age 91, right hemisphere 67.5
2693 Female, age 94, both hemispheres 59.5
2692 Male, age 74, both hemispheres 53.6
2622 Female, age 67, right hemisphere 50.1
Perirhinal gyrus
nTPM: 78.9
1847 Female, age 91, left hemisphere 92.8
1794 Male, age 80, right hemisphere 86.7
1841 Female, age 85, right hemisphere 82.2
2848 Male, age 76, right hemisphere 68.7
2521 Female, age 94, right hemisphere 64.2
Subiculum
nTPM: 68.9
1901 Male, age 80, both hemispheres 77.1
1977 Female, age 85, both hemispheres 76.5
2438 Female, age 94, left hemisphere 69.0
2042 Male, age 76, both hemispheres 66.9
2619 Male, age 74, both hemispheres 65.8
2729 Female, age 91, right hemisphere 58.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 168.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 168.6
Samples: 197

Max nTPM: 401.0
Min nTPM: 94.8
Std nTPM: 43.8
Median nTPM: 159.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 401.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 315.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 310.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 309.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 291.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 289.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 282.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 271.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 258.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 258.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 247.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 210.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 210.9
FF:10169-103B7 60 years, female 253.4
FF:10153-102I9 76 years, female 168.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 157.1
Pig sample Sample description nTPM
Subiculum
nTPM: 114.5
Samples: 4

Max nTPM: 155.4
Min nTPM: 96.0
Sample A Female 155.4
Sample B Female 108.6
Sample C Male 96.0
Sample D Male 98.1
Dorsal hippocampus
nTPM: 157.1
Samples: 4

Max nTPM: 197.8
Min nTPM: 116.1
Sample A Female 197.8
Sample B Female 149.0
Sample C Male 165.4
Sample D Male 116.1
Entorhinal cortex
nTPM: 118.5
Samples: 4

Max nTPM: 137.1
Min nTPM: 87.6
Sample A Female 136.5
Sample B Female 137.1
Sample C Male 112.6
Sample D Male 87.6
Ventral hippocampus
nTPM: 128.2
Samples: 4

Max nTPM: 154.6
Min nTPM: 113.6
Sample A Female 127.0
Sample B Female 113.6
Sample C Male 117.7
Sample D Male 154.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.5
Samples: 4

Max nTPM: 49.1
Min nTPM: 38.2
Sample A Male 38.2
Sample B Male 46.2
Sample C Female 49.1
Sample D Female 40.6
Hippocampal formation
nTPM: 43.8
Samples: 4

Max nTPM: 54.5
Min nTPM: 37.4
Sample A Male 54.5
Sample B Male 37.4
Sample C Female 39.0
Sample D Female 44.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
68745006 Antisense, RP_050210_01_A12, Mouse strain C57BL/6J (56 days, male) 2.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org