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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
97.1
nTPM
GTEx:
97.1
nTPM
FANTOM5:
157.8
Scaled Tags Per Million
Pig:
82.0
nTPM
Mouse:
48.3
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
97.1
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 97.1
Samples: 105
Max nTPM: 138.6
Min nTPM: 34.2
Std nTPM: 21.8
Median nTPM: 0.0
386_1
76 years, male
138.6
377_1
82 years, female
136.3
452_1
88 years, female
132.5
353_1
82 years, female
131.7
319_1
81 years, male
129.7
352_1
62 years, male
128.9
172_1
72 years, female
126.9
237_1
82 years, male
126.3
243_1
75 years, male
125.7
355_1
70 years, female
125.1
218_1
71 years, female
124.5
99_1
64 years, male
124.1
447_1
81 years, male
122.0
356_1
87 years, female
121.9
321_1
62 years, female
121.7
379_1
60 years, male
120.6
506_1
65 years, male
120.2
376_1
75 years, female
120.1
480_1
63 years, male
119.9
349_1
83 years, male
119.6
163_1
78 years, male
119.2
375_1
74 years, female
118.7
286_1
68 years, female
117.8
351_1
91 years, male
117.0
354_1
81 years, female
117.0
229_1
69 years, female
116.2
350_1
84 years, female
115.3
6_1
73 years, female
112.6
115_1
83 years, male
112.5
292_1
71 years, male
112.3
394_1
75 years, female
111.7
384_1
83 years, male
111.2
295_1
61 years, female
111.0
503_1
68 years, male
111.0
4_1
88 years, female
110.4
389_1
86 years, female
108.5
293_1
68 years, female
108.1
2_1
77 years, female
107.9
251_1
78 years, male
106.9
189_1
76 years, male
106.3
526_1
61 years, male
105.5
177_1
74 years, male
105.3
396_1
62 years, male
105.0
320_1
89 years, female
104.8
517_1
88 years, male
103.5
322_1
76 years, male
102.5
35_1
74 years, female
102.3
406_1
79 years, male
101.7
9_1
66 years, female
101.2
347_1
72 years, male
101.0
264_1
73 years, female
100.9
404_1
82 years, female
100.6
425_1
59 years, female
98.3
173_1
67 years, male
98.0
126_1
63 years, male
97.3
335_1
73 years, female
95.9
317_1
60 years, male
95.7
468_1
89 years, male
95.3
246_1
77 years, male
94.1
18_1
88 years, male
93.4
117_1
61 years, male
93.1
405_1
91 years, male
92.4
145_1
84 years, male
92.3
316_1
62 years, male
91.9
518_1
75 years, female
91.6
265_1
87 years, male
91.3
17_1
71 years, male
89.7
120_1
70 years, female
89.0
348_1
84 years, male
88.4
153_1
70 years, female
86.6
291_1
76 years, male
86.3
42_1
85 years, male
85.2
499_1
55 years, female
85.0
137_1
83 years, male
84.1
266_1
85 years, male
83.8
162_1
79 years, female
83.3
313_1
79 years, female
82.6
318_1
68 years, male
81.5
142_1
61 years, female
80.1
254_1
77 years, female
79.5
81_1
67 years, male
79.4
217_1
76 years, male
78.3
109_1
81 years, female
77.3
311_1
78 years, male
77.3
43_1
64 years, female
77.2
119_1
70 years, female
74.9
315_1
62 years, female
74.5
501_1
88 years, male
73.9
324_1
76 years, male
73.5
288_1
66 years, female
73.3
415_1
77 years, female
73.3
41_1
94 years, female
73.2
32_1
67 years, male
72.7
314_1
67 years, male
72.1
466_1
57 years, female
70.2
495_1
57 years, female
68.5
307_1
66 years, female
66.4
414_1
84 years, female
63.3
308_1
70 years, female
61.4
490_1
67 years, female
60.8
89_1
63 years, male
57.7
149_1
88 years, male
56.3
139_1
64 years, female
53.7
491_1
89 years, female
42.9
413_1
59 years, female
34.2
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
