HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:52.9 nTPM
HPA Brain:208.8 nTPM
GTEx:52.9 nTPM
FANTOM5:136.0 Scaled Tags Per Million
Pig:91.8 nTPM
Mouse:132.7 nTPM
Allen mouse:15.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018257
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 208.8
Sample id Sample description nTPM
Hippocampus
nTPM: 159.9
1898 Male, age 80, left hemisphere 213.9
1855 Male, age 76, left hemisphere 183.6
2148 Female, age 91, left hemisphere 157.4
2621 Female, age 67, right hemisphere 148.4
1911 Female, age 85, right hemisphere 136.2
2529 Female, age 94, left hemisphere 119.9
Dentate gyrus
nTPM: 185.8
2010 Male, age 76, both hemispheres 225.8
2528 Male, age 74, both hemispheres 195.8
1927 Female, age 91, both hemispheres 190.7
2246 Female, age 85, both hemispheres 189.9
2530 Female, age 94, left hemisphere 167.4
2531 Female, age 67, both hemispheres 145.2
Entorhinal gyrus
nTPM: 159.7
2764 Male, age 80, right hemisphere 199.7
2613 Female, age 94, left hemisphere 194.0
1938 Female, age 85, left hemisphere 177.4
1787 Male, age 76, left hemisphere 152.3
2686 Male, age 75, right hemisphere 125.3
2117 Female, age 91, right hemisphere 109.5
Hippocampus, CA1
nTPM: 208.8
2749 Male, age 80, left hemisphere 265.3
1873 Female, age 85, both hemispheres 221.3
2527 Male, age 74, both hemispheres 213.9
2045 Male, age 76, both hemispheres 177.5
2082 Female, age 91, right hemisphere 165.7
Hippocampus, CA2
nTPM: 198.2
1892 Male, age 76, both hemispheres 223.3
2249 Male, age 74, both hemispheres 221.3
1963 Male, age 80, left hemisphere 214.1
1940 Female, age 85, left hemisphere 206.5
2437 Female, age 94, left hemisphere 185.3
2113 Female, age 91, right hemisphere 139.0
Hippocampus, CA3
nTPM: 199.5
2436 Male, age 74, both hemispheres 308.7
2137 Male, age 80, left hemisphere 211.1
1867 Male, age 76, both hemispheres 205.1
1891 Female, age 85, both hemispheres 163.7
2620 Female, age 94, left hemisphere 161.7
2861 Female, age 67, both hemispheres 147.0
Parahippocampal cortex
nTPM: 160.5
1850 Male, age 80, both hemispheres 200.2
1933 Female, age 85, both hemispheres 194.2
2018 Male, age 76, both hemispheres 178.3
2693 Female, age 94, both hemispheres 159.6
1990 Female, age 91, right hemisphere 150.4
2532 Female, age 72, left hemisphere 149.6
2692 Male, age 74, both hemispheres 148.5
2250 Female, age 67, right hemisphere 142.9
2245 Female, age 91, both hemispheres 142.7
2622 Female, age 67, right hemisphere 138.1
Perirhinal gyrus
nTPM: 178.5
1847 Female, age 91, left hemisphere 221.1
1841 Female, age 85, right hemisphere 194.7
2521 Female, age 94, right hemisphere 192.7
1794 Male, age 80, right hemisphere 168.9
2848 Male, age 76, right hemisphere 115.2
Subiculum
nTPM: 158.0
1977 Female, age 85, both hemispheres 186.0
1901 Male, age 80, both hemispheres 168.0
2438 Female, age 94, left hemisphere 160.6
2619 Male, age 74, both hemispheres 160.2
2729 Female, age 91, right hemisphere 141.5
2042 Male, age 76, both hemispheres 131.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 52.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.9
Samples: 197

Max nTPM: 185.1
Min nTPM: 6.8
Std nTPM: 33.2
Median nTPM: 43.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 185.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 173.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 146.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 141.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 140.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 130.9
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 130.2
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 128.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 126.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 115.1
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 112.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 136.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 136.0
FF:10169-103B7 60 years, female 152.6
FF:10153-102I9 76 years, female 119.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 91.8
Pig sample Sample description nTPM
Subiculum
nTPM: 53.5
Samples: 4

Max nTPM: 63.3
Min nTPM: 42.8
Sample A Female 63.3
Sample B Female 47.5
Sample C Male 60.2
Sample D Male 42.8
Dorsal hippocampus
nTPM: 80.1
Samples: 4

Max nTPM: 120.0
Min nTPM: 48.1
Sample A Female 120.0
Sample B Female 90.9
Sample C Male 48.1
Sample D Male 61.2
Entorhinal cortex
nTPM: 70.6
Samples: 4

Max nTPM: 76.9
Min nTPM: 64.5
Sample A Female 67.8
Sample B Female 76.9
Sample C Male 73.2
Sample D Male 64.5
Ventral hippocampus
nTPM: 91.9
Samples: 4

Max nTPM: 123.0
Min nTPM: 56.4
Sample A Female 123.0
Sample B Female 56.4
Sample C Male 116.4
Sample D Male 71.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 132.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 132.8
Samples: 4

Max nTPM: 150.5
Min nTPM: 121.5
Sample A Male 121.5
Sample B Male 135.1
Sample C Female 123.9
Sample D Female 150.5
Hippocampal formation
nTPM: 113.6
Samples: 4

Max nTPM: 119.0
Min nTPM: 107.7
Sample A Male 113.9
Sample B Male 107.7
Sample C Female 119.0
Sample D Female 113.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.5
77620429 Antisense, RP_070205_01_H11, Mouse strain C57BL/6J (56 days, male) 17.8
79490112 Antisense, RP_070205_01_H11, Mouse strain C57BL/6J (56 days, male) 16.8
68196975 Antisense, RP_040928_01_A05, Mouse strain C57BL/6J (56 days, male) 13.2

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