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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
261.4
nTPM
GTEx:
261.4
nTPM
FANTOM5:
75.7
Scaled Tags Per Million
Pig:
29.9
nTPM
Mouse:
183.7
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
261.4
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 261.4
Samples: 105
Max nTPM: 794.0
Min nTPM: 100.0
Std nTPM: 126.2
Median nTPM:
218_1
71 years, female
794.0
307_1
66 years, female
620.2
173_1
67 years, male
538.7
447_1
81 years, male
529.8
321_1
62 years, female
517.2
308_1
70 years, female
503.9
145_1
84 years, male
467.0
347_1
72 years, male
460.2
6_1
73 years, female
455.3
491_1
89 years, female
455.3
316_1
62 years, male
438.6
375_1
74 years, female
422.9
379_1
60 years, male
419.4
41_1
94 years, female
417.4
490_1
67 years, female
414.0
317_1
60 years, male
410.6
354_1
81 years, female
408.9
322_1
76 years, male
408.3
384_1
83 years, male
404.5
495_1
57 years, female
403.0
139_1
64 years, female
395.9
237_1
82 years, male
368.2
386_1
76 years, male
355.1
353_1
82 years, female
338.9
43_1
64 years, female
324.0
35_1
74 years, female
323.3
311_1
78 years, male
322.3
119_1
70 years, female
321.5
42_1
85 years, male
318.2
350_1
84 years, female
316.1
315_1
62 years, female
295.9
117_1
61 years, male
292.7
314_1
67 years, male
292.5
295_1
61 years, female
284.2
349_1
83 years, male
276.8
324_1
76 years, male
276.7
348_1
84 years, male
274.0
120_1
70 years, female
269.8
318_1
68 years, male
264.3
518_1
75 years, female
252.7
142_1
61 years, female
252.5
2_1
77 years, female
252.0
291_1
76 years, male
250.6
351_1
91 years, male
249.6
137_1
83 years, male
248.8
89_1
63 years, male
241.3
389_1
86 years, female
238.7
17_1
71 years, male
237.8
4_1
88 years, female
236.9
18_1
88 years, male
234.7
452_1
88 years, female
227.7
243_1
75 years, male
227.6
415_1
77 years, female
224.4
163_1
78 years, male
222.9
265_1
87 years, male
219.1
335_1
73 years, female
218.6
288_1
66 years, female
215.6
126_1
63 years, male
212.5
172_1
72 years, female
212.2
81_1
67 years, male
208.6
352_1
62 years, male
208.6
506_1
65 years, male
207.3
376_1
75 years, female
205.5
405_1
91 years, male
199.8
153_1
70 years, female
193.9
319_1
81 years, male
192.1
468_1
89 years, male
183.6
501_1
88 years, male
180.7
394_1
75 years, female
178.6
396_1
62 years, male
176.7
425_1
59 years, female
174.5
320_1
89 years, female
173.6
526_1
61 years, male
172.4
413_1
59 years, female
171.1
356_1
87 years, female
170.1
115_1
83 years, male
169.2
264_1
73 years, female
168.8
313_1
79 years, female
168.6
480_1
63 years, male
167.3
99_1
64 years, male
166.4
177_1
74 years, male
166.4
355_1
70 years, female
165.3
517_1
88 years, male
164.9
466_1
57 years, female
164.8
293_1
68 years, female
162.5
414_1
84 years, female
162.0
254_1
77 years, female
161.1
217_1
76 years, male
160.6
404_1
82 years, female
154.8
377_1
82 years, female
154.3
32_1
67 years, male
153.4
162_1
79 years, female
144.9
149_1
88 years, male
144.6
266_1
85 years, male
138.5
286_1
68 years, female
138.4
189_1
76 years, male
137.2
499_1
55 years, female
131.7
229_1
69 years, female
129.0
503_1
68 years, male
127.3
246_1
77 years, male
123.0
406_1
79 years, male
119.2
9_1
66 years, female
114.0
109_1
81 years, female
112.3
292_1
71 years, male
101.4
251_1
78 years, male
100.0
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.