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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
239.2
nTPM
FANTOM5:
496.0
Scaled Tags Per Million
Pig:
349.5
nTPM
Allen mouse:
1.9
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
239.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 226.2
2301
Female, age 85, both hemispheres
265.9
2188
Female, age 91, both hemispheres
239.3
2090
Male, age 80, both hemispheres
235.5
1984
Male, age 76, both hemispheres
164.0
Dorsal cochlear nucleus nTPM: 229.5
2378
Male, age 80, both hemispheres
254.0
2802
Male, age 74, right hemisphere
247.7
2187
Female, age 91, both hemispheres
246.6
2370
Male, age 61, both hemispheres
202.5
2058
Male, age 76, both hemispheres
196.7
Dorsal tegmental nucleus nTPM: 229.8
2358
Male, age 61, both hemispheres
275.4
2326
Male, age 74, both hemispheres
226.9
2083
Male, age 80, both hemispheres
217.0
1936
Male, age 76, left hemisphere
199.9
Dorsolateral tegmental area nTPM: 231.6
2337
Male, age 61, both hemispheres
307.7
2751
Female, age 85, both hemispheres
253.5
2654
Male, age 80, both hemispheres
221.3
2360
Male, age 74, both hemispheres
201.5
2141
Male, age 76, both hemispheres
173.7
Kolliker-Fuse nucleus nTPM: 236.8
2315
Male, age 76, right hemisphere
268.2
2793
Female, age 91, left hemisphere
230.9
2163
Male, age 80, both hemispheres
211.5
Lateral lemniscal nuclei nTPM: 200.4
2746
Female, age 85, left hemisphere
210.7
2036
Male, age 80, both hemispheres
204.9
2320
Female, age 91, left hemisphere
202.1
2169
Male, age 76, both hemispheres
192.9
2453
Male, age 74, right hemisphere
191.2
Lateral parabrachial nucleus nTPM: 239.2
2792
Male, age 76, both hemispheres
306.8
2013
Male, age 80, both hemispheres
257.4
2139
Female, age 85, right hemisphere
210.1
2790
Male, age 61, both hemispheres
182.7
Lateral vestibular nucleus nTPM: 212.7
2311
Male, age 80, both hemispheres
241.1
2184
Male, age 76, both hemispheres
184.4
Locus coeruleus nTPM: 200.1
2720
Male, age 74, both hemispheres
214.7
2317
Female, age 72, unknown
208.3
2123
Female, age 91, both hemispheres
202.3
2014
Male, age 55, unknown
201.5
2788
Male, age 74, unknown
195.9
2162
Male, age 80, both hemispheres
192.8
1980
Male, age 76, both hemispheres
185.4
Medial parabrachial nucleus nTPM: 216.1
2170
Female, age 91, both hemispheres
264.5
2854
Male, age 80, both hemispheres
247.2
2463
Female, age 85, right hemisphere
198.3
2786
Male, age 76, both hemispheres
196.5
2156
Male, age 61, both hemispheres
173.9
Medial periolivary nuclei nTPM: 209.0
2791
Male, age 74, right hemisphere
240.6
2081
Male, age 80, both hemispheres
231.2
2063
Male, age 76, both hemispheres
196.7
2458
Female, age 91, both hemispheres
194.8
2171
Female, age 85, both hemispheres
181.7
Motor facial nucleus nTPM: 211.3
2365
Male, age 74, right hemisphere
236.7
2697
Female, age 85, both hemispheres
228.3
2795
Female, age 91, both hemispheres
225.0
2126
Male, age 61, both hemispheres
204.8
2062
Male, age 76, both hemispheres
188.2
2327
Male, age 80, both hemispheres
184.9
Motor trigeminal nucleus nTPM: 192.7
2079
Male, age 80, both hemispheres
205.5
2560
Male, age 74, both hemispheres
198.4
2321
Female, age 91, both hemispheres
192.0
2309
Male, age 76, both hemispheres
183.8
2335
Male, age 61, both hemispheres
183.7
Nuclei of the trapezoid body nTPM: 195.6
1983
Male, age 76, both hemispheres
224.6
2166
Male, age 80, both hemispheres
195.3
2368
Female, age 91, both hemispheres
191.9
2159
Male, age 61, both hemispheres
191.6
2735
Female, age 85, both hemispheres
174.6
Nucleus raphe magnus nTPM: 200.5
2051
Male, age 76, both hemispheres
241.4
2455
Male, age 74, both hemispheres
215.4
2328
Male, age 80, both hemispheres
202.1
2459
Female, age 91, both hemispheres
196.8
2160
Male, age 61, both hemispheres
180.5
2172
Female, age 85, both hemispheres
167.0
Paramedian reticular nucleus nTPM: 221.3
2052
Male, age 76, both hemispheres
255.6
2050
Female, age 85, both hemispheres
225.8
2313
Male, age 61, both hemispheres
205.4
2057
Male, age 80, both hemispheres
198.3
Pedunculopontine tegmental nucleus nTPM: 236.1
2338
Male, age 61, both hemispheres
279.2
2334
Male, age 80, both hemispheres
230.6
1921
Female, age 85, both hemispheres
198.4
Pontine nuclei nTPM: 210.2
2319
Female, age 91, both hemispheres
243.3
2454
Male, age 74, left hemisphere
232.0
1863
Male, age 55, unknown
220.7
2109
Female, age 72, unknown
214.1
2115
Male, age 80, left hemisphere
205.8
1968
Male, age 76, left hemisphere
197.7
2727
Male, age 61, right hemisphere
193.6
2787
Female, age 85, both hemispheres
174.3
Pontine raphe nucleus nTPM: 192.9
2853
Male, age 76, midline
195.3
2122
Female, age 85, midline
190.5
Posteroventral cochlear nucleus nTPM: 237.0
2341
Male, age 80, both hemispheres
292.6
2135
Female, age 91, both hemispheres
274.4
2371
Male, age 61, both hemispheres
236.1
2070
Male, age 76, both hemispheres
200.1
2752
Female, age 85, both hemispheres
181.8
Principal sensory trigeminal nucleus nTPM: 198.9
2367
Female, age 91, left hemisphere
248.0
2324
Male, age 76, both hemispheres
194.2
2008
Male, age 80, left hemisphere
186.7
2158
Male, age 61, both hemispheres
166.8
Reticular pontine nucleus, caudal nTPM: 198.7
2559
Male, age 74, both hemispheres
223.0
2092
Male, age 76, both hemispheres
213.7
2457
Female, age 91, both hemispheres
197.5
2332
Male, age 80, right hemisphere
160.5
Reticular pontine nucleus, oral nTPM: 225.7
2361
Male, age 74, both hemispheres
249.7
1939
Male, age 80, both hemispheres
234.6
2012
Female, age 85, both hemispheres
220.4
2366
Female, age 91, both hemispheres
219.6
2167
Male, age 76, both hemispheres
204.2
Reticulotegmental nucleus nTPM: 209.1
2322
Female, age 91, both hemispheres
223.5
2333
Male, age 80, both hemispheres
218.6
2452
Male, age 74, both hemispheres
203.9
2325
Male, age 76, both hemispheres
190.5
Spinal trigeminal nucleus, oral nTPM: 185.3
2164
Male, age 80, both hemispheres
202.2
1978
Male, age 76, both hemispheres
179.0
2737
Female, age 85, both hemispheres
174.7
Subcoeruleus area nTPM: 209.6
2369
Female, age 85, left hemisphere
271.4
1958
Male, age 80, both hemispheres
220.1
2451
Male, age 74, both hemispheres
191.9
2323
Female, age 91, left hemisphere
182.6
2089
Male, age 76, left hemisphere
182.0
Superior olive nTPM: 212.8
2020
Male, age 76, both hemispheres
238.6
2364
Male, age 74, right hemisphere
231.2
1875
Female, age 85, both hemispheres
204.8
2329
Male, age 80, right hemisphere
203.7
2561
Female, age 91, both hemispheres
185.6
Ventral periolivary nuclei nTPM: 210.1
2023
Male, age 76, both hemispheres
254.0
2130
Female, age 85, both hemispheres
204.3
2165
Male, age 80, both hemispheres
194.6
2794
Female, age 91, left hemisphere
187.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 223.1
2359
Male, age 61, both hemispheres
259.3
2840
Female, age 85, both hemispheres
242.4
2161
Male, age 80, both hemispheres
220.9
1959
Male, age 76, both hemispheres
213.2
2456
Female, age 91, both hemispheres
207.0
2449
Male, age 74, both hemispheres
195.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
349.5
Pig sample
Sample description
nTPM
Pons nTPM: 349.5
Samples: 4
Max nTPM: 426.9
Min nTPM: 273.1
Sample A
Female
337.5
Sample B
Female
273.1
Sample C
Male
360.4
Sample D
Male
426.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
