HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:75.9 nTPM
HPA Brain:31.2 nTPM
GTEx:75.9 nTPM
FANTOM5:14.3 Scaled Tags Per Million
Pig:43.1 nTPM
Mouse:122.1 nTPM
Allen mouse:13.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB013265
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.2
Sample id Sample description nTPM
Hippocampus
nTPM: 30.9
2621 Female, age 67, right hemisphere 36.2
2529 Female, age 94, left hemisphere 34.1
2148 Female, age 91, left hemisphere 31.2
1911 Female, age 85, right hemisphere 29.9
1855 Male, age 76, left hemisphere 27.2
1898 Male, age 80, left hemisphere 27.2
Dentate gyrus
nTPM: 29.4
2531 Female, age 67, both hemispheres 36.0
1927 Female, age 91, both hemispheres 31.4
2010 Male, age 76, both hemispheres 29.4
2530 Female, age 94, left hemisphere 27.6
2246 Female, age 85, both hemispheres 26.6
2528 Male, age 74, both hemispheres 25.2
Entorhinal gyrus
nTPM: 27.5
2686 Male, age 75, right hemisphere 33.7
2613 Female, age 94, left hemisphere 28.4
1787 Male, age 76, left hemisphere 27.2
2764 Male, age 80, right hemisphere 26.3
1938 Female, age 85, left hemisphere 24.8
2117 Female, age 91, right hemisphere 24.8
Hippocampus, CA1
nTPM: 28.7
2045 Male, age 76, both hemispheres 32.9
2527 Male, age 74, both hemispheres 29.5
2749 Male, age 80, left hemisphere 28.4
2082 Female, age 91, right hemisphere 28.2
1873 Female, age 85, both hemispheres 24.5
Hippocampus, CA2
nTPM: 28.3
1963 Male, age 80, left hemisphere 39.3
2113 Female, age 91, right hemisphere 30.4
1892 Male, age 76, both hemispheres 28.9
2437 Female, age 94, left hemisphere 26.1
1940 Female, age 85, left hemisphere 25.3
2249 Male, age 74, both hemispheres 19.6
Hippocampus, CA3
nTPM: 31.2
2861 Female, age 67, both hemispheres 41.5
2620 Female, age 94, left hemisphere 37.4
1867 Male, age 76, both hemispheres 30.4
1891 Female, age 85, both hemispheres 27.8
2137 Male, age 80, left hemisphere 27.3
2436 Male, age 74, both hemispheres 22.6
Parahippocampal cortex
nTPM: 25.3
2622 Female, age 67, right hemisphere 31.0
2692 Male, age 74, both hemispheres 29.4
1990 Female, age 91, right hemisphere 26.8
2693 Female, age 94, both hemispheres 25.5
1933 Female, age 85, both hemispheres 25.2
2245 Female, age 91, both hemispheres 25.0
2250 Female, age 67, right hemisphere 25.0
2018 Male, age 76, both hemispheres 23.0
2532 Female, age 72, left hemisphere 22.1
1850 Male, age 80, both hemispheres 20.4
Perirhinal gyrus
nTPM: 21.7
2521 Female, age 94, right hemisphere 24.1
1847 Female, age 91, left hemisphere 23.3
1794 Male, age 80, right hemisphere 21.9
2848 Male, age 76, right hemisphere 20.6
1841 Female, age 85, right hemisphere 18.8
Subiculum
nTPM: 25.2
2042 Male, age 76, both hemispheres 32.7
2729 Female, age 91, right hemisphere 28.1
2619 Male, age 74, both hemispheres 26.9
1901 Male, age 80, both hemispheres 24.1
1977 Female, age 85, both hemispheres 22.3
2438 Female, age 94, left hemisphere 17.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 75.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 75.9
Samples: 197

Max nTPM: 261.2
Min nTPM: 27.2
Std nTPM: 31.7
Median nTPM: 71.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 261.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 224.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 179.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 167.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 150.1
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 147.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 146.7
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 137.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 136.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 136.2
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 130.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.3
FF:10153-102I9 76 years, female 22.4
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.1
Pig sample Sample description nTPM
Subiculum
nTPM: 38.8
Samples: 4

Max nTPM: 50.8
Min nTPM: 32.0
Sample A Female 50.8
Sample B Female 36.1
Sample C Male 36.2
Sample D Male 32.0
Dorsal hippocampus
nTPM: 39.2
Samples: 4

Max nTPM: 46.3
Min nTPM: 30.5
Sample A Female 46.3
Sample B Female 37.0
Sample C Male 43.0
Sample D Male 30.5
Entorhinal cortex
nTPM: 43.1
Samples: 4

Max nTPM: 49.3
Min nTPM: 38.1
Sample A Female 42.1
Sample B Female 42.9
Sample C Male 49.3
Sample D Male 38.1
Ventral hippocampus
nTPM: 37.3
Samples: 4

Max nTPM: 46.1
Min nTPM: 29.7
Sample A Female 32.8
Sample B Female 29.7
Sample C Male 46.1
Sample D Male 40.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 122.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 122.1
Samples: 4

Max nTPM: 126.2
Min nTPM: 116.9
Sample A Male 125.9
Sample B Male 119.3
Sample C Female 116.9
Sample D Female 126.2
Hippocampal formation
nTPM: 116.5
Samples: 4

Max nTPM: 122.3
Min nTPM: 106.3
Sample A Male 106.3
Sample B Male 117.7
Sample C Female 122.3
Sample D Female 119.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.4
69080515 Antisense, RP_050324_02_C04, Mouse strain C57BL/6J (56 days, male) 13.4

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