HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:488.4 nTPM
HPA Brain:421.1 nTPM
GTEx:488.4 nTPM
FANTOM5:340.9 Scaled Tags Per Million
Pig:50.2 nTPM
Mouse:90.5 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029841
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 421.1
Sample id Sample description nTPM
Hippocampus
nTPM: 268.5
1911 Female, age 85, right hemisphere 321.0
2529 Female, age 94, left hemisphere 308.3
1898 Male, age 80, left hemisphere 279.4
2621 Female, age 67, right hemisphere 274.7
1855 Male, age 76, left hemisphere 221.2
2148 Female, age 91, left hemisphere 206.4
Dentate gyrus
nTPM: 276.9
2530 Female, age 94, left hemisphere 466.7
2528 Male, age 74, both hemispheres 312.5
2010 Male, age 76, both hemispheres 305.4
2246 Female, age 85, both hemispheres 211.5
2531 Female, age 67, both hemispheres 199.7
1927 Female, age 91, both hemispheres 165.8
Entorhinal gyrus
nTPM: 315.6
2117 Female, age 91, right hemisphere 486.0
2764 Male, age 80, right hemisphere 385.5
2686 Male, age 75, right hemisphere 304.5
1938 Female, age 85, left hemisphere 280.0
2613 Female, age 94, left hemisphere 222.3
1787 Male, age 76, left hemisphere 215.4
Hippocampus, CA1
nTPM: 206.2
2527 Male, age 74, both hemispheres 266.0
1873 Female, age 85, both hemispheres 243.1
2082 Female, age 91, right hemisphere 233.3
2749 Male, age 80, left hemisphere 193.6
2045 Male, age 76, both hemispheres 95.2
Hippocampus, CA2
nTPM: 298.8
1963 Male, age 80, left hemisphere 419.4
2249 Male, age 74, both hemispheres 364.2
2437 Female, age 94, left hemisphere 304.9
2113 Female, age 91, right hemisphere 264.5
1940 Female, age 85, left hemisphere 258.5
1892 Male, age 76, both hemispheres 181.1
Hippocampus, CA3
nTPM: 202.1
1891 Female, age 85, both hemispheres 433.1
1867 Male, age 76, both hemispheres 232.0
2436 Male, age 74, both hemispheres 219.1
2137 Male, age 80, left hemisphere 129.4
2861 Female, age 67, both hemispheres 102.0
2620 Female, age 94, left hemisphere 96.7
Parahippocampal cortex
nTPM: 249.6
2532 Female, age 72, left hemisphere 367.9
2692 Male, age 74, both hemispheres 359.2
1990 Female, age 91, right hemisphere 310.7
1850 Male, age 80, both hemispheres 285.2
2018 Male, age 76, both hemispheres 258.4
1933 Female, age 85, both hemispheres 256.1
2245 Female, age 91, both hemispheres 226.2
2693 Female, age 94, both hemispheres 172.2
2250 Female, age 67, right hemisphere 155.7
2622 Female, age 67, right hemisphere 104.4
Perirhinal gyrus
nTPM: 175.6
2848 Male, age 76, right hemisphere 186.8
1794 Male, age 80, right hemisphere 178.0
1847 Female, age 91, left hemisphere 173.1
1841 Female, age 85, right hemisphere 172.1
2521 Female, age 94, right hemisphere 168.0
Subiculum
nTPM: 421.1
2042 Male, age 76, both hemispheres 593.8
1901 Male, age 80, both hemispheres 521.6
1977 Female, age 85, both hemispheres 439.6
2438 Female, age 94, left hemisphere 391.1
2619 Male, age 74, both hemispheres 307.6
2729 Female, age 91, right hemisphere 272.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 488.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 488.4
Samples: 197

Max nTPM: 1743.9
Min nTPM: 80.7
Std nTPM: 301.8
Median nTPM: 417.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 1743.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1438.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 1387.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1339.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 1329.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1233.6
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1183.6
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 1183.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 1143.1
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 1139.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 1102.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 340.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 340.9
FF:10153-102I9 76 years, female 413.9
FF:10169-103B7 60 years, female 267.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 50.2
Pig sample Sample description nTPM
Subiculum
nTPM: 37.0
Samples: 4

Max nTPM: 40.4
Min nTPM: 31.2
Sample A Female 40.4
Sample B Female 36.7
Sample C Male 31.2
Sample D Male 39.6
Dorsal hippocampus
nTPM: 50.3
Samples: 4

Max nTPM: 62.6
Min nTPM: 31.3
Sample A Female 62.6
Sample B Female 44.6
Sample C Male 62.5
Sample D Male 31.3
Entorhinal cortex
nTPM: 38.6
Samples: 4

Max nTPM: 44.0
Min nTPM: 36.1
Sample A Female 36.1
Sample B Female 44.0
Sample C Male 38.1
Sample D Male 36.1
Ventral hippocampus
nTPM: 41.7
Samples: 4

Max nTPM: 50.2
Min nTPM: 36.2
Sample A Female 50.2
Sample B Female 36.4
Sample C Male 36.2
Sample D Male 43.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 90.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 90.5
Samples: 4

Max nTPM: 96.3
Min nTPM: 81.6
Sample A Male 96.3
Sample B Male 91.4
Sample C Female 92.8
Sample D Female 81.6
Hippocampal formation
nTPM: 84.3
Samples: 4

Max nTPM: 93.1
Min nTPM: 80.2
Sample A Male 93.1
Sample B Male 80.2
Sample C Female 81.8
Sample D Female 82.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
71656904 Antisense, RP_050927_04_E05, Mouse strain C57BL/6J (56 days, male) 2.7

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