HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:7.4 nTPM
HPA Brain:25.3 nTPM
GTEx:7.4 nTPM
FANTOM5:14.7 Scaled Tags Per Million
Pig:21.4 nTPM
Mouse:11.2 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB034925
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.3
Sample id Sample description nTPM
Hippocampus
nTPM: 25.3
1911 Female, age 85, right hemisphere 27.3
1898 Male, age 80, left hemisphere 26.7
2529 Female, age 94, left hemisphere 26.3
2621 Female, age 67, right hemisphere 26.2
2148 Female, age 91, left hemisphere 22.8
1855 Male, age 76, left hemisphere 22.5
Dentate gyrus
nTPM: 24.0
2530 Female, age 94, left hemisphere 33.2
2528 Male, age 74, both hemispheres 24.5
1927 Female, age 91, both hemispheres 23.5
2010 Male, age 76, both hemispheres 23.0
2531 Female, age 67, both hemispheres 20.6
2246 Female, age 85, both hemispheres 19.3
Entorhinal gyrus
nTPM: 22.6
2686 Male, age 75, right hemisphere 27.2
2117 Female, age 91, right hemisphere 24.5
1938 Female, age 85, left hemisphere 23.8
2764 Male, age 80, right hemisphere 22.1
2613 Female, age 94, left hemisphere 19.1
1787 Male, age 76, left hemisphere 18.8
Hippocampus, CA1
nTPM: 22.6
2082 Female, age 91, right hemisphere 25.8
1873 Female, age 85, both hemispheres 25.5
2527 Male, age 74, both hemispheres 22.5
2045 Male, age 76, both hemispheres 21.1
2749 Male, age 80, left hemisphere 18.1
Hippocampus, CA2
nTPM: 23.9
2437 Female, age 94, left hemisphere 26.8
2249 Male, age 74, both hemispheres 26.4
2113 Female, age 91, right hemisphere 23.7
1940 Female, age 85, left hemisphere 23.5
1963 Male, age 80, left hemisphere 23.2
1892 Male, age 76, both hemispheres 20.1
Hippocampus, CA3
nTPM: 22.2
1891 Female, age 85, both hemispheres 28.2
2436 Male, age 74, both hemispheres 22.5
1867 Male, age 76, both hemispheres 21.9
2861 Female, age 67, both hemispheres 21.1
2137 Male, age 80, left hemisphere 21.0
2620 Female, age 94, left hemisphere 18.3
Parahippocampal cortex
nTPM: 22.7
2692 Male, age 74, both hemispheres 26.9
1850 Male, age 80, both hemispheres 24.7
2622 Female, age 67, right hemisphere 24.5
2018 Male, age 76, both hemispheres 23.0
1933 Female, age 85, both hemispheres 22.7
2245 Female, age 91, both hemispheres 22.3
1990 Female, age 91, right hemisphere 21.8
2250 Female, age 67, right hemisphere 21.2
2532 Female, age 72, left hemisphere 20.8
2693 Female, age 94, both hemispheres 19.5
Perirhinal gyrus
nTPM: 22.2
1841 Female, age 85, right hemisphere 25.8
1847 Female, age 91, left hemisphere 22.4
1794 Male, age 80, right hemisphere 21.7
2848 Male, age 76, right hemisphere 20.7
2521 Female, age 94, right hemisphere 20.2
Subiculum
nTPM: 23.8
1901 Male, age 80, both hemispheres 25.4
2042 Male, age 76, both hemispheres 24.4
2619 Male, age 74, both hemispheres 23.9
1977 Female, age 85, both hemispheres 23.8
2729 Female, age 91, right hemisphere 23.3
2438 Female, age 94, left hemisphere 22.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.4
Samples: 197

Max nTPM: 14.4
Min nTPM: 2.9
Std nTPM: 1.8
Median nTPM: 7.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 14.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 13.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 12.8
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 12.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 11.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 11.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 11.2
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 11.2
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 10.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 10.5
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 10.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.7
FF:10153-102I9 76 years, female 17.9
FF:10169-103B7 60 years, female 11.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.4
Pig sample Sample description nTPM
Subiculum
nTPM: 21.4
Samples: 4

Max nTPM: 25.0
Min nTPM: 19.0
Sample A Female 21.4
Sample B Female 19.0
Sample C Male 20.1
Sample D Male 25.0
Dorsal hippocampus
nTPM: 19.2
Samples: 4

Max nTPM: 20.9
Min nTPM: 17.4
Sample A Female 19.0
Sample B Female 17.4
Sample C Male 20.9
Sample D Male 19.5
Entorhinal cortex
nTPM: 19.2
Samples: 4

Max nTPM: 21.1
Min nTPM: 17.4
Sample A Female 17.4
Sample B Female 18.8
Sample C Male 19.3
Sample D Male 21.1
Ventral hippocampus
nTPM: 19.2
Samples: 4

Max nTPM: 21.8
Min nTPM: 16.9
Sample A Female 21.8
Sample B Female 19.3
Sample C Male 16.9
Sample D Male 18.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.2
Samples: 4

Max nTPM: 11.9
Min nTPM: 8.5
Sample A Male 10.6
Sample B Male 11.9
Sample C Female 9.8
Sample D Female 8.5
Hippocampal formation
nTPM: 11.2
Samples: 4

Max nTPM: 11.5
Min nTPM: 10.6
Sample A Male 10.6
Sample B Male 11.5
Sample C Female 11.3
Sample D Female 11.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
73817944 Antisense, RP_051214_01_A07, Mouse strain C57BL/6J (56 days, male) 1.6
77887882 Antisense, RP_070208_04_C11, Mouse strain C57BL/6J (56 days, male) 0.8
633283 Antisense, RP_040907_02_D10, Mouse strain C57BL/6J (56 days, male) 0.2

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