HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:37.2 nTPM
HPA Brain:37.9 nTPM
GTEx:37.2 nTPM
FANTOM5:65.3 Scaled Tags Per Million
Pig:24.5 nTPM
Mouse:31.4 nTPM
Allen mouse:9.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042858
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.9
Sample id Sample description nTPM
Hippocampus
nTPM: 37.1
2529 Female, age 94, left hemisphere 39.5
2148 Female, age 91, left hemisphere 39.2
1855 Male, age 76, left hemisphere 38.3
2621 Female, age 67, right hemisphere 37.3
1898 Male, age 80, left hemisphere 34.7
1911 Female, age 85, right hemisphere 33.7
Dentate gyrus
nTPM: 37.2
2010 Male, age 76, both hemispheres 41.7
2531 Female, age 67, both hemispheres 37.9
2528 Male, age 74, both hemispheres 37.7
2530 Female, age 94, left hemisphere 36.8
2246 Female, age 85, both hemispheres 36.0
1927 Female, age 91, both hemispheres 33.1
Entorhinal gyrus
nTPM: 35.5
2686 Male, age 75, right hemisphere 39.8
2764 Male, age 80, right hemisphere 39.3
1787 Male, age 76, left hemisphere 35.5
2613 Female, age 94, left hemisphere 34.1
2117 Female, age 91, right hemisphere 33.5
1938 Female, age 85, left hemisphere 30.5
Hippocampus, CA1
nTPM: 35.5
1873 Female, age 85, both hemispheres 39.2
2082 Female, age 91, right hemisphere 35.8
2045 Male, age 76, both hemispheres 34.8
2527 Male, age 74, both hemispheres 34.1
2749 Male, age 80, left hemisphere 33.5
Hippocampus, CA2
nTPM: 35.5
1963 Male, age 80, left hemisphere 38.7
1892 Male, age 76, both hemispheres 38.3
1940 Female, age 85, left hemisphere 36.3
2113 Female, age 91, right hemisphere 33.8
2249 Male, age 74, both hemispheres 33.2
2437 Female, age 94, left hemisphere 33.0
Hippocampus, CA3
nTPM: 37.9
2620 Female, age 94, left hemisphere 43.9
1867 Male, age 76, both hemispheres 43.0
2861 Female, age 67, both hemispheres 37.2
1891 Female, age 85, both hemispheres 35.9
2436 Male, age 74, both hemispheres 35.2
2137 Male, age 80, left hemisphere 32.1
Parahippocampal cortex
nTPM: 34.4
2622 Female, age 67, right hemisphere 39.3
2692 Male, age 74, both hemispheres 39.0
2018 Male, age 76, both hemispheres 37.5
2245 Female, age 91, both hemispheres 34.5
2532 Female, age 72, left hemisphere 34.5
1850 Male, age 80, both hemispheres 34.1
1990 Female, age 91, right hemisphere 32.8
1933 Female, age 85, both hemispheres 31.9
2693 Female, age 94, both hemispheres 30.6
2250 Female, age 67, right hemisphere 30.2
Perirhinal gyrus
nTPM: 31.2
1794 Male, age 80, right hemisphere 33.9
1847 Female, age 91, left hemisphere 32.3
1841 Female, age 85, right hemisphere 31.9
2848 Male, age 76, right hemisphere 29.5
2521 Female, age 94, right hemisphere 28.6
Subiculum
nTPM: 37.7
2042 Male, age 76, both hemispheres 42.4
1901 Male, age 80, both hemispheres 39.6
2619 Male, age 74, both hemispheres 38.7
2438 Female, age 94, left hemisphere 37.5
2729 Female, age 91, right hemisphere 36.9
1977 Female, age 85, both hemispheres 31.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.2
Samples: 197

Max nTPM: 110.9
Min nTPM: 14.3
Std nTPM: 9.5
Median nTPM: 36.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 110.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 70.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 62.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 58.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 57.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 57.1
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 54.3
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 53.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 53.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 53.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 52.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 65.3
FF:10153-102I9 76 years, female 81.8
FF:10169-103B7 60 years, female 48.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.5
Pig sample Sample description nTPM
Subiculum
nTPM: 22.8
Samples: 4

Max nTPM: 24.5
Min nTPM: 20.8
Sample A Female 24.5
Sample B Female 23.3
Sample C Male 20.8
Sample D Male 22.6
Dorsal hippocampus
nTPM: 23.6
Samples: 4

Max nTPM: 27.7
Min nTPM: 20.8
Sample A Female 27.7
Sample B Female 23.9
Sample C Male 21.9
Sample D Male 20.8
Entorhinal cortex
nTPM: 19.1
Samples: 4

Max nTPM: 20.5
Min nTPM: 17.4
Sample A Female 20.5
Sample B Female 19.5
Sample C Male 17.4
Sample D Male 18.9
Ventral hippocampus
nTPM: 24.5
Samples: 4

Max nTPM: 27.1
Min nTPM: 21.5
Sample A Female 23.5
Sample B Female 21.5
Sample C Male 27.1
Sample D Male 26.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.3
Samples: 4

Max nTPM: 28.6
Min nTPM: 25.5
Sample A Male 28.4
Sample B Male 26.8
Sample C Female 28.6
Sample D Female 25.5
Hippocampal formation
nTPM: 31.4
Samples: 4

Max nTPM: 32.8
Min nTPM: 30.5
Sample A Male 31.2
Sample B Male 30.5
Sample C Female 31.0
Sample D Female 32.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.6
69169660 Antisense, RP_050321_04_A04, Mouse strain C57BL/6J (56 days, male) 9.6

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