HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:50.9 nTPM
HPA Brain:24.3 nTPM
GTEx:50.9 nTPM
FANTOM5:193.9 Scaled Tags Per Million
Pig:69.8 nTPM
Mouse:81.5 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039824
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.3
Sample id Sample description nTPM
Hippocampus
nTPM: 24.0
1898 Male, age 80, left hemisphere 31.8
2529 Female, age 94, left hemisphere 26.1
1855 Male, age 76, left hemisphere 25.0
1911 Female, age 85, right hemisphere 21.7
2621 Female, age 67, right hemisphere 20.7
2148 Female, age 91, left hemisphere 18.5
Dentate gyrus
nTPM: 22.2
2010 Male, age 76, both hemispheres 27.7
2530 Female, age 94, left hemisphere 25.4
1927 Female, age 91, both hemispheres 23.7
2246 Female, age 85, both hemispheres 20.9
2528 Male, age 74, both hemispheres 20.4
2531 Female, age 67, both hemispheres 15.4
Entorhinal gyrus
nTPM: 20.3
2117 Female, age 91, right hemisphere 23.2
1938 Female, age 85, left hemisphere 23.1
1787 Male, age 76, left hemisphere 21.3
2764 Male, age 80, right hemisphere 20.2
2686 Male, age 75, right hemisphere 17.5
2613 Female, age 94, left hemisphere 16.4
Hippocampus, CA1
nTPM: 24.1
2749 Male, age 80, left hemisphere 32.3
1873 Female, age 85, both hemispheres 26.2
2045 Male, age 76, both hemispheres 22.5
2527 Male, age 74, both hemispheres 20.5
2082 Female, age 91, right hemisphere 19.3
Hippocampus, CA2
nTPM: 23.5
1892 Male, age 76, both hemispheres 29.5
2249 Male, age 74, both hemispheres 27.0
1963 Male, age 80, left hemisphere 22.5
2437 Female, age 94, left hemisphere 22.4
1940 Female, age 85, left hemisphere 21.3
2113 Female, age 91, right hemisphere 18.3
Hippocampus, CA3
nTPM: 24.3
2436 Male, age 74, both hemispheres 31.5
1867 Male, age 76, both hemispheres 30.6
2137 Male, age 80, left hemisphere 26.9
1891 Female, age 85, both hemispheres 25.5
2620 Female, age 94, left hemisphere 16.8
2861 Female, age 67, both hemispheres 14.3
Parahippocampal cortex
nTPM: 21.8
1850 Male, age 80, both hemispheres 29.2
2250 Female, age 67, right hemisphere 25.9
2018 Male, age 76, both hemispheres 24.1
1933 Female, age 85, both hemispheres 23.7
2245 Female, age 91, both hemispheres 22.5
1990 Female, age 91, right hemisphere 21.7
2693 Female, age 94, both hemispheres 21.5
2692 Male, age 74, both hemispheres 19.7
2532 Female, age 72, left hemisphere 17.3
2622 Female, age 67, right hemisphere 12.5
Perirhinal gyrus
nTPM: 22.9
1847 Female, age 91, left hemisphere 27.1
1841 Female, age 85, right hemisphere 26.3
1794 Male, age 80, right hemisphere 23.3
2848 Male, age 76, right hemisphere 18.9
2521 Female, age 94, right hemisphere 18.7
Subiculum
nTPM: 23.0
2438 Female, age 94, left hemisphere 29.0
1901 Male, age 80, both hemispheres 26.7
2042 Male, age 76, both hemispheres 25.5
1977 Female, age 85, both hemispheres 21.3
2619 Male, age 74, both hemispheres 17.7
2729 Female, age 91, right hemisphere 17.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 50.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 50.9
Samples: 197

Max nTPM: 89.5
Min nTPM: 28.3
Std nTPM: 9.7
Median nTPM: 49.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 89.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 88.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 87.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 86.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 76.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 70.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 67.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 67.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 66.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 65.5
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 65.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 193.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 193.9
FF:10169-103B7 60 years, female 246.1
FF:10153-102I9 76 years, female 141.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 69.8
Pig sample Sample description nTPM
Subiculum
nTPM: 49.5
Samples: 4

Max nTPM: 58.6
Min nTPM: 43.6
Sample A Female 58.6
Sample B Female 49.1
Sample C Male 43.6
Sample D Male 46.6
Dorsal hippocampus
nTPM: 69.9
Samples: 4

Max nTPM: 89.3
Min nTPM: 54.2
Sample A Female 89.3
Sample B Female 72.3
Sample C Male 63.6
Sample D Male 54.2
Entorhinal cortex
nTPM: 51.1
Samples: 4

Max nTPM: 70.1
Min nTPM: 39.3
Sample A Female 48.8
Sample B Female 70.1
Sample C Male 46.1
Sample D Male 39.3
Ventral hippocampus
nTPM: 61.2
Samples: 4

Max nTPM: 71.2
Min nTPM: 49.3
Sample A Female 67.7
Sample B Female 49.3
Sample C Male 56.7
Sample D Male 71.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 81.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 70.6
Samples: 4

Max nTPM: 76.9
Min nTPM: 67.5
Sample A Male 67.5
Sample B Male 70.4
Sample C Female 76.9
Sample D Female 67.6
Hippocampal formation
nTPM: 81.5
Samples: 4

Max nTPM: 91.1
Min nTPM: 74.3
Sample A Male 91.1
Sample B Male 79.3
Sample C Female 81.3
Sample D Female 74.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
70527975 Antisense, RP_050623_01_E09, Mouse strain C57BL/6J (56 days, male) 3.0

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