HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:20.5 nTPM
HPA Brain:24.3 nTPM
GTEx:20.5 nTPM
FANTOM5:36.3 Scaled Tags Per Million
Pig:43.7 nTPM
Mouse:57.8 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040918
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.3
Sample id Sample description nTPM
Hippocampus
nTPM: 23.9
2621 Female, age 67, right hemisphere 26.7
1898 Male, age 80, left hemisphere 25.5
1855 Male, age 76, left hemisphere 25.0
2148 Female, age 91, left hemisphere 23.7
2529 Female, age 94, left hemisphere 23.3
1911 Female, age 85, right hemisphere 19.3
Dentate gyrus
nTPM: 21.6
2010 Male, age 76, both hemispheres 24.7
1927 Female, age 91, both hemispheres 22.9
2246 Female, age 85, both hemispheres 22.9
2528 Male, age 74, both hemispheres 22.0
2530 Female, age 94, left hemisphere 19.2
2531 Female, age 67, both hemispheres 17.9
Entorhinal gyrus
nTPM: 22.3
1787 Male, age 76, left hemisphere 24.7
2764 Male, age 80, right hemisphere 24.7
1938 Female, age 85, left hemisphere 23.5
2613 Female, age 94, left hemisphere 21.7
2117 Female, age 91, right hemisphere 21.3
2686 Male, age 75, right hemisphere 18.2
Hippocampus, CA1
nTPM: 22.8
2749 Male, age 80, left hemisphere 25.9
2527 Male, age 74, both hemispheres 24.8
1873 Female, age 85, both hemispheres 22.6
2045 Male, age 76, both hemispheres 21.3
2082 Female, age 91, right hemisphere 19.3
Hippocampus, CA2
nTPM: 22.8
2249 Male, age 74, both hemispheres 26.6
1963 Male, age 80, left hemisphere 24.0
1940 Female, age 85, left hemisphere 23.7
1892 Male, age 76, both hemispheres 22.2
2113 Female, age 91, right hemisphere 20.7
2437 Female, age 94, left hemisphere 19.6
Hippocampus, CA3
nTPM: 24.3
2436 Male, age 74, both hemispheres 42.4
2137 Male, age 80, left hemisphere 22.0
1891 Female, age 85, both hemispheres 21.3
1867 Male, age 76, both hemispheres 21.1
2861 Female, age 67, both hemispheres 20.9
2620 Female, age 94, left hemisphere 18.2
Parahippocampal cortex
nTPM: 22.7
2622 Female, age 67, right hemisphere 25.9
2532 Female, age 72, left hemisphere 25.3
2692 Male, age 74, both hemispheres 24.9
1850 Male, age 80, both hemispheres 23.8
1933 Female, age 85, both hemispheres 22.5
2250 Female, age 67, right hemisphere 22.2
2245 Female, age 91, both hemispheres 21.6
1990 Female, age 91, right hemisphere 21.0
2018 Male, age 76, both hemispheres 20.3
2693 Female, age 94, both hemispheres 19.0
Perirhinal gyrus
nTPM: 23.0
1847 Female, age 91, left hemisphere 27.0
1794 Male, age 80, right hemisphere 26.4
1841 Female, age 85, right hemisphere 22.8
2848 Male, age 76, right hemisphere 20.8
2521 Female, age 94, right hemisphere 18.2
Subiculum
nTPM: 22.2
2619 Male, age 74, both hemispheres 24.9
2729 Female, age 91, right hemisphere 22.4
2438 Female, age 94, left hemisphere 22.3
1901 Male, age 80, both hemispheres 22.1
1977 Female, age 85, both hemispheres 21.9
2042 Male, age 76, both hemispheres 19.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.5
Samples: 197

Max nTPM: 41.1
Min nTPM: 7.2
Std nTPM: 5.4
Median nTPM: 20.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 41.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 40.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 34.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 34.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 33.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 32.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 31.8
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 31.2
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 29.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 29.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 29.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.3
FF:10153-102I9 76 years, female 38.3
FF:10169-103B7 60 years, female 34.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 43.7
Pig sample Sample description nTPM
Subiculum
nTPM: 38.4
Samples: 4

Max nTPM: 47.4
Min nTPM: 34.4
Sample A Female 47.4
Sample B Female 36.0
Sample C Male 34.4
Sample D Male 35.6
Dorsal hippocampus
nTPM: 42.0
Samples: 4

Max nTPM: 52.6
Min nTPM: 34.5
Sample A Female 52.6
Sample B Female 39.5
Sample C Male 41.4
Sample D Male 34.5
Entorhinal cortex
nTPM: 43.7
Samples: 4

Max nTPM: 50.0
Min nTPM: 35.6
Sample A Female 42.6
Sample B Female 50.0
Sample C Male 46.5
Sample D Male 35.6
Ventral hippocampus
nTPM: 41.5
Samples: 4

Max nTPM: 46.6
Min nTPM: 33.6
Sample A Female 39.7
Sample B Female 33.6
Sample C Male 46.6
Sample D Male 46.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 57.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 55.9
Samples: 4

Max nTPM: 59.3
Min nTPM: 46.9
Sample A Male 59.3
Sample B Male 58.1
Sample C Female 59.1
Sample D Female 46.9
Hippocampal formation
nTPM: 57.8
Samples: 4

Max nTPM: 63.1
Min nTPM: 52.9
Sample A Male 63.1
Sample B Male 54.3
Sample C Female 52.9
Sample D Female 60.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
68523300 Antisense, RP_050118_02_E02, Mouse strain C57BL/6J (56 days, male) 1.4

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