HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:91.2 nTPM
HPA Brain:82.8 nTPM
GTEx:91.2 nTPM
FANTOM5:34.0 Scaled Tags Per Million
Pig:3.8 nTPM
Mouse:32.3 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA009078
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 82.8
Sample id Sample description nTPM
Hippocampus
nTPM: 76.6
1898 Male, age 80, left hemisphere 90.7
1855 Male, age 76, left hemisphere 81.1
1911 Female, age 85, right hemisphere 78.9
2621 Female, age 67, right hemisphere 74.7
2529 Female, age 94, left hemisphere 69.3
2148 Female, age 91, left hemisphere 65.1
Dentate gyrus
nTPM: 75.4
2530 Female, age 94, left hemisphere 85.1
2010 Male, age 76, both hemispheres 83.3
1927 Female, age 91, both hemispheres 76.8
2528 Male, age 74, both hemispheres 75.5
2246 Female, age 85, both hemispheres 73.9
2531 Female, age 67, both hemispheres 57.6
Entorhinal gyrus
nTPM: 72.2
1938 Female, age 85, left hemisphere 80.3
2764 Male, age 80, right hemisphere 78.8
2117 Female, age 91, right hemisphere 74.7
1787 Male, age 76, left hemisphere 70.9
2613 Female, age 94, left hemisphere 68.4
2686 Male, age 75, right hemisphere 60.4
Hippocampus, CA1
nTPM: 77.7
2749 Male, age 80, left hemisphere 90.7
1873 Female, age 85, both hemispheres 82.1
2527 Male, age 74, both hemispheres 74.9
2045 Male, age 76, both hemispheres 73.1
2082 Female, age 91, right hemisphere 67.8
Hippocampus, CA2
nTPM: 81.1
2249 Male, age 74, both hemispheres 87.2
1892 Male, age 76, both hemispheres 86.5
1963 Male, age 80, left hemisphere 85.2
2437 Female, age 94, left hemisphere 78.5
1940 Female, age 85, left hemisphere 76.2
2113 Female, age 91, right hemisphere 73.0
Hippocampus, CA3
nTPM: 75.8
2436 Male, age 74, both hemispheres 96.8
1891 Female, age 85, both hemispheres 82.5
2137 Male, age 80, left hemisphere 79.1
1867 Male, age 76, both hemispheres 77.1
2620 Female, age 94, left hemisphere 67.3
2861 Female, age 67, both hemispheres 52.1
Parahippocampal cortex
nTPM: 72.0
1850 Male, age 80, both hemispheres 87.4
1990 Female, age 91, right hemisphere 77.1
1933 Female, age 85, both hemispheres 74.8
2018 Male, age 76, both hemispheres 74.2
2532 Female, age 72, left hemisphere 72.7
2692 Male, age 74, both hemispheres 72.7
2693 Female, age 94, both hemispheres 71.4
2245 Female, age 91, both hemispheres 67.8
2250 Female, age 67, right hemisphere 65.5
2622 Female, age 67, right hemisphere 56.9
Perirhinal gyrus
nTPM: 82.1
1794 Male, age 80, right hemisphere 87.8
1847 Female, age 91, left hemisphere 87.3
1841 Female, age 85, right hemisphere 84.5
2848 Male, age 76, right hemisphere 77.9
2521 Female, age 94, right hemisphere 73.2
Subiculum
nTPM: 82.8
2438 Female, age 94, left hemisphere 96.2
2042 Male, age 76, both hemispheres 86.6
1901 Male, age 80, both hemispheres 85.6
2619 Male, age 74, both hemispheres 79.9
1977 Female, age 85, both hemispheres 77.9
2729 Female, age 91, right hemisphere 70.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 91.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 91.2
Samples: 197

Max nTPM: 160.7
Min nTPM: 36.2
Std nTPM: 17.4
Median nTPM: 89.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 160.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 144.2
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 135.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 133.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 130.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 129.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 128.9
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 127.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 127.7
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 127.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 126.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.0
FF:10169-103B7 60 years, female 40.5
FF:10153-102I9 76 years, female 27.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.8
Pig sample Sample description nTPM
Subiculum
nTPM: 3.8
Samples: 4

Max nTPM: 6.8
Min nTPM: 1.3
Sample A Female 1.3
Sample B Female 4.1
Sample C Male 6.8
Sample D Male 2.8
Dorsal hippocampus
nTPM: 2.9
Samples: 4

Max nTPM: 3.8
Min nTPM: 1.9
Sample A Female 1.9
Sample B Female 3.5
Sample C Male 2.2
Sample D Male 3.8
Entorhinal cortex
nTPM: 3.5
Samples: 4

Max nTPM: 5.0
Min nTPM: 2.8
Sample A Female 2.8
Sample B Female 3.3
Sample C Male 5.0
Sample D Male 2.8
Ventral hippocampus
nTPM: 3.2
Samples: 4

Max nTPM: 4.5
Min nTPM: 2.2
Sample A Female 3.4
Sample B Female 4.5
Sample C Male 2.2
Sample D Male 2.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.7
Samples: 4

Max nTPM: 30.7
Min nTPM: 27.3
Sample A Male 27.3
Sample B Male 30.3
Sample C Female 30.4
Sample D Female 30.7
Hippocampal formation
nTPM: 32.3
Samples: 4

Max nTPM: 34.3
Min nTPM: 30.6
Sample A Male 32.5
Sample B Male 30.6
Sample C Female 34.3
Sample D Female 31.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
70429130 Antisense, RP_050614_01_A10, Mouse strain C57BL/6J (56 days, male) 1.9

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