HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:41.9 nTPM
HPA Brain:46.1 nTPM
GTEx:41.9 nTPM
FANTOM5:37.5 Scaled Tags Per Million
Pig:18.9 nTPM
Mouse:34.8 nTPM
Allen mouse:1.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040436
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.1
Sample id Sample description nTPM
Hippocampus
nTPM: 44.1
1898 Male, age 80, left hemisphere 48.5
1911 Female, age 85, right hemisphere 46.5
2529 Female, age 94, left hemisphere 43.7
1855 Male, age 76, left hemisphere 43.6
2148 Female, age 91, left hemisphere 42.0
2621 Female, age 67, right hemisphere 40.6
Dentate gyrus
nTPM: 44.6
2010 Male, age 76, both hemispheres 51.0
1927 Female, age 91, both hemispheres 46.8
2530 Female, age 94, left hemisphere 45.5
2528 Male, age 74, both hemispheres 44.3
2246 Female, age 85, both hemispheres 42.0
2531 Female, age 67, both hemispheres 38.3
Entorhinal gyrus
nTPM: 41.2
2117 Female, age 91, right hemisphere 47.3
1787 Male, age 76, left hemisphere 46.0
1938 Female, age 85, left hemisphere 44.9
2613 Female, age 94, left hemisphere 37.0
2764 Male, age 80, right hemisphere 36.2
2686 Male, age 75, right hemisphere 35.7
Hippocampus, CA1
nTPM: 46.0
2749 Male, age 80, left hemisphere 53.6
1873 Female, age 85, both hemispheres 45.4
2045 Male, age 76, both hemispheres 45.3
2527 Male, age 74, both hemispheres 44.6
2082 Female, age 91, right hemisphere 41.1
Hippocampus, CA2
nTPM: 45.1
1963 Male, age 80, left hemisphere 51.1
1892 Male, age 76, both hemispheres 50.1
2249 Male, age 74, both hemispheres 46.2
2113 Female, age 91, right hemisphere 42.8
1940 Female, age 85, left hemisphere 42.0
2437 Female, age 94, left hemisphere 38.7
Hippocampus, CA3
nTPM: 45.5
2137 Male, age 80, left hemisphere 51.8
1891 Female, age 85, both hemispheres 50.5
2436 Male, age 74, both hemispheres 49.7
1867 Male, age 76, both hemispheres 49.1
2620 Female, age 94, left hemisphere 38.5
2861 Female, age 67, both hemispheres 33.4
Parahippocampal cortex
nTPM: 40.4
2018 Male, age 76, both hemispheres 52.0
2692 Male, age 74, both hemispheres 45.4
1990 Female, age 91, right hemisphere 44.3
1933 Female, age 85, both hemispheres 41.7
1850 Male, age 80, both hemispheres 40.9
2250 Female, age 67, right hemisphere 40.6
2245 Female, age 91, both hemispheres 36.3
2532 Female, age 72, left hemisphere 36.0
2693 Female, age 94, both hemispheres 35.8
2622 Female, age 67, right hemisphere 30.5
Perirhinal gyrus
nTPM: 40.4
1794 Male, age 80, right hemisphere 41.6
1847 Female, age 91, left hemisphere 41.4
1841 Female, age 85, right hemisphere 40.7
2848 Male, age 76, right hemisphere 40.6
2521 Female, age 94, right hemisphere 37.5
Subiculum
nTPM: 46.1
2042 Male, age 76, both hemispheres 51.9
1901 Male, age 80, both hemispheres 48.9
1977 Female, age 85, both hemispheres 46.4
2729 Female, age 91, right hemisphere 45.8
2438 Female, age 94, left hemisphere 44.1
2619 Male, age 74, both hemispheres 39.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.9
Samples: 197

Max nTPM: 59.9
Min nTPM: 27.2
Std nTPM: 5.8
Median nTPM: 41.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 59.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 59.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 59.3
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 54.6
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 54.5
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 54.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 53.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 53.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 53.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 52.8
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 52.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 37.5
FF:10153-102I9 76 years, female 44.9
FF:10169-103B7 60 years, female 30.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.9
Pig sample Sample description nTPM
Subiculum
nTPM: 16.6
Samples: 4

Max nTPM: 19.1
Min nTPM: 14.6
Sample A Female 19.1
Sample B Female 17.0
Sample C Male 15.5
Sample D Male 14.6
Dorsal hippocampus
nTPM: 18.9
Samples: 4

Max nTPM: 23.1
Min nTPM: 13.5
Sample A Female 23.1
Sample B Female 20.0
Sample C Male 18.9
Sample D Male 13.5
Entorhinal cortex
nTPM: 15.2
Samples: 4

Max nTPM: 16.9
Min nTPM: 12.6
Sample A Female 15.0
Sample B Female 16.2
Sample C Male 16.9
Sample D Male 12.6
Ventral hippocampus
nTPM: 16.9
Samples: 4

Max nTPM: 18.8
Min nTPM: 15.9
Sample A Female 16.3
Sample B Female 15.9
Sample C Male 16.4
Sample D Male 18.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 34.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.0
Samples: 4

Max nTPM: 32.3
Min nTPM: 29.4
Sample A Male 29.4
Sample B Male 30.3
Sample C Female 32.1
Sample D Female 32.3
Hippocampal formation
nTPM: 34.9
Samples: 4

Max nTPM: 37.4
Min nTPM: 32.3
Sample A Male 37.4
Sample B Male 32.3
Sample C Female 34.5
Sample D Female 35.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.8
69885684 Antisense, RP_050512_03_B12, Mouse strain C57BL/6J (56 days, male) 1.8
71717143 Antisense, RP_050512_03_B12, Mouse strain C57BL/6J (56 days, male) 1.7

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