HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:30.9 nTPM
HPA Brain:77.8 nTPM
GTEx:30.9 nTPM
FANTOM5:34.1 Scaled Tags Per Million
Pig:33.0 nTPM
Mouse:8.3 nTPM
Allen mouse:14.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB033734
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 77.8
Sample id Sample description nTPM
Hippocampus
nTPM: 62.8
2148 Female, age 91, left hemisphere 65.8
1911 Female, age 85, right hemisphere 65.3
1855 Male, age 76, left hemisphere 63.6
2529 Female, age 94, left hemisphere 63.5
2621 Female, age 67, right hemisphere 59.9
1898 Male, age 80, left hemisphere 58.5
Dentate gyrus
nTPM: 60.4
2531 Female, age 67, both hemispheres 63.4
2010 Male, age 76, both hemispheres 63.2
2246 Female, age 85, both hemispheres 62.4
1927 Female, age 91, both hemispheres 62.1
2528 Male, age 74, both hemispheres 59.3
2530 Female, age 94, left hemisphere 52.3
Entorhinal gyrus
nTPM: 77.8
2613 Female, age 94, left hemisphere 88.2
2764 Male, age 80, right hemisphere 82.5
1938 Female, age 85, left hemisphere 80.8
2117 Female, age 91, right hemisphere 76.1
1787 Male, age 76, left hemisphere 69.7
2686 Male, age 75, right hemisphere 69.2
Hippocampus, CA1
nTPM: 62.6
2045 Male, age 76, both hemispheres 74.6
2749 Male, age 80, left hemisphere 70.3
2527 Male, age 74, both hemispheres 63.7
2082 Female, age 91, right hemisphere 55.6
1873 Female, age 85, both hemispheres 48.7
Hippocampus, CA2
nTPM: 61.4
1940 Female, age 85, left hemisphere 71.8
1963 Male, age 80, left hemisphere 62.1
2437 Female, age 94, left hemisphere 62.1
1892 Male, age 76, both hemispheres 61.9
2113 Female, age 91, right hemisphere 58.5
2249 Male, age 74, both hemispheres 51.8
Hippocampus, CA3
nTPM: 61.4
2861 Female, age 67, both hemispheres 71.0
1867 Male, age 76, both hemispheres 65.1
2620 Female, age 94, left hemisphere 64.0
1891 Female, age 85, both hemispheres 62.4
2137 Male, age 80, left hemisphere 53.1
2436 Male, age 74, both hemispheres 52.9
Parahippocampal cortex
nTPM: 68.2
2532 Female, age 72, left hemisphere 77.5
2692 Male, age 74, both hemispheres 73.2
2622 Female, age 67, right hemisphere 72.9
1933 Female, age 85, both hemispheres 72.8
1850 Male, age 80, both hemispheres 67.3
2018 Male, age 76, both hemispheres 66.4
1990 Female, age 91, right hemisphere 66.2
2245 Female, age 91, both hemispheres 66.2
2693 Female, age 94, both hemispheres 64.6
2250 Female, age 67, right hemisphere 55.3
Perirhinal gyrus
nTPM: 64.4
1847 Female, age 91, left hemisphere 70.7
2521 Female, age 94, right hemisphere 69.2
1794 Male, age 80, right hemisphere 68.7
1841 Female, age 85, right hemisphere 56.8
2848 Male, age 76, right hemisphere 56.8
Subiculum
nTPM: 69.5
2042 Male, age 76, both hemispheres 72.0
2438 Female, age 94, left hemisphere 71.6
1901 Male, age 80, both hemispheres 70.6
2619 Male, age 74, both hemispheres 69.9
1977 Female, age 85, both hemispheres 67.0
2729 Female, age 91, right hemisphere 66.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.9
Samples: 197

Max nTPM: 63.3
Min nTPM: 10.7
Std nTPM: 7.9
Median nTPM: 30.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 63.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 63.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 59.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 52.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 51.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 51.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 48.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 45.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 43.3
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 42.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 42.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.1
FF:10153-102I9 76 years, female 48.5
FF:10169-103B7 60 years, female 19.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.0
Pig sample Sample description nTPM
Subiculum
nTPM: 32.5
Samples: 4

Max nTPM: 39.3
Min nTPM: 29.6
Sample A Female 39.3
Sample B Female 30.2
Sample C Male 30.7
Sample D Male 29.6
Dorsal hippocampus
nTPM: 30.5
Samples: 4

Max nTPM: 38.2
Min nTPM: 21.6
Sample A Female 38.2
Sample B Female 28.0
Sample C Male 34.1
Sample D Male 21.6
Entorhinal cortex
nTPM: 29.3
Samples: 4

Max nTPM: 31.0
Min nTPM: 26.9
Sample A Female 30.8
Sample B Female 28.6
Sample C Male 31.0
Sample D Male 26.9
Ventral hippocampus
nTPM: 33.0
Samples: 4

Max nTPM: 40.3
Min nTPM: 25.7
Sample A Female 33.9
Sample B Female 25.7
Sample C Male 40.3
Sample D Male 32.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.3
Samples: 4

Max nTPM: 9.7
Min nTPM: 5.7
Sample A Male 9.6
Sample B Male 5.7
Sample C Female 9.7
Sample D Female 8.1
Hippocampal formation
nTPM: 6.4
Samples: 4

Max nTPM: 9.1
Min nTPM: 4.9
Sample A Male 4.9
Sample B Male 5.9
Sample C Female 5.6
Sample D Female 9.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.0
176962 Antisense, RP_040507_02_B11, Mouse strain C57BL/6J (56 days, male) 14.0
130515 Antisense, RP_040507_02_B11, Mouse strain C57BL/6J (56 days, male) 3.2

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