HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:18.6 nTPM
HPA Brain:327.5 nTPM
GTEx:18.6 nTPM
FANTOM5:284.8 Scaled Tags Per Million
Pig:155.6 nTPM
Mouse:123.3 nTPM
Allen mouse:17.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 327.5
Sample id Sample description nTPM
Hippocampus
nTPM: 284.7
2621 Female, age 67, right hemisphere 376.3
2148 Female, age 91, left hemisphere 351.0
2529 Female, age 94, left hemisphere 293.4
1911 Female, age 85, right hemisphere 286.2
1898 Male, age 80, left hemisphere 217.0
1855 Male, age 76, left hemisphere 184.0
Dentate gyrus
nTPM: 284.7
2531 Female, age 67, both hemispheres 449.1
1927 Female, age 91, both hemispheres 334.1
2528 Male, age 74, both hemispheres 287.4
2530 Female, age 94, left hemisphere 240.3
2246 Female, age 85, both hemispheres 224.4
2010 Male, age 76, both hemispheres 172.8
Entorhinal gyrus
nTPM: 277.4
2613 Female, age 94, left hemisphere 413.0
2686 Male, age 75, right hemisphere 315.1
2764 Male, age 80, right hemisphere 254.3
1938 Female, age 85, left hemisphere 254.2
1787 Male, age 76, left hemisphere 216.0
2117 Female, age 91, right hemisphere 211.6
Hippocampus, CA1
nTPM: 308.3
2749 Male, age 80, left hemisphere 431.7
2527 Male, age 74, both hemispheres 357.3
2082 Female, age 91, right hemisphere 297.0
1873 Female, age 85, both hemispheres 236.5
2045 Male, age 76, both hemispheres 218.8
Hippocampus, CA2
nTPM: 241.5
2113 Female, age 91, right hemisphere 322.7
2249 Male, age 74, both hemispheres 281.4
1963 Male, age 80, left hemisphere 267.9
2437 Female, age 94, left hemisphere 232.9
1892 Male, age 76, both hemispheres 180.7
1940 Female, age 85, left hemisphere 163.6
Hippocampus, CA3
nTPM: 327.5
2620 Female, age 94, left hemisphere 474.3
2137 Male, age 80, left hemisphere 435.6
2861 Female, age 67, both hemispheres 434.4
2436 Male, age 74, both hemispheres 248.1
1867 Male, age 76, both hemispheres 190.5
1891 Female, age 85, both hemispheres 182.1
Parahippocampal cortex
nTPM: 252.4
2245 Female, age 91, both hemispheres 410.1
2622 Female, age 67, right hemisphere 312.2
2693 Female, age 94, both hemispheres 282.2
2250 Female, age 67, right hemisphere 261.8
1933 Female, age 85, both hemispheres 239.5
1990 Female, age 91, right hemisphere 219.3
2532 Female, age 72, left hemisphere 214.1
2692 Male, age 74, both hemispheres 203.0
1850 Male, age 80, both hemispheres 191.3
2018 Male, age 76, both hemispheres 190.1
Perirhinal gyrus
nTPM: 255.5
2521 Female, age 94, right hemisphere 288.0
1847 Female, age 91, left hemisphere 283.8
1794 Male, age 80, right hemisphere 242.1
2848 Male, age 76, right hemisphere 233.2
1841 Female, age 85, right hemisphere 230.4
Subiculum
nTPM: 201.4
2729 Female, age 91, right hemisphere 279.5
1901 Male, age 80, both hemispheres 202.5
2619 Male, age 74, both hemispheres 201.6
1977 Female, age 85, both hemispheres 196.9
2042 Male, age 76, both hemispheres 177.5
2438 Female, age 94, left hemisphere 150.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.6
Samples: 197

Max nTPM: 71.9
Min nTPM: 0.4
Std nTPM: 15.9
Median nTPM: 13.3
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 71.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 67.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 65.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 63.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 58.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 57.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 56.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 55.6
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 54.7
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 54.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 52.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 284.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 284.8
FF:10169-103B7 60 years, female 286.6
FF:10153-102I9 76 years, female 283.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 155.6
Pig sample Sample description nTPM
Subiculum
nTPM: 121.5
Samples: 4

Max nTPM: 151.5
Min nTPM: 99.3
Sample A Female 151.5
Sample B Female 110.9
Sample C Male 124.3
Sample D Male 99.3
Dorsal hippocampus
nTPM: 155.6
Samples: 4

Max nTPM: 185.1
Min nTPM: 102.8
Sample A Female 181.0
Sample B Female 185.1
Sample C Male 102.8
Sample D Male 153.6
Entorhinal cortex
nTPM: 143.6
Samples: 4

Max nTPM: 175.1
Min nTPM: 111.2
Sample A Female 160.5
Sample B Female 111.2
Sample C Male 175.1
Sample D Male 127.7
Ventral hippocampus
nTPM: 154.9
Samples: 4

Max nTPM: 197.4
Min nTPM: 117.0
Sample A Female 117.0
Sample B Female 125.8
Sample C Male 179.4
Sample D Male 197.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 123.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 109.6
Samples: 4

Max nTPM: 124.2
Min nTPM: 97.1
Sample A Male 105.2
Sample B Male 97.1
Sample C Female 111.9
Sample D Female 124.2
Hippocampal formation
nTPM: 123.4
Samples: 4

Max nTPM: 131.1
Min nTPM: 118.7
Sample A Male 124.5
Sample B Male 131.1
Sample C Female 118.7
Sample D Female 119.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.5
75831724 Antisense, RP_060601_02_A09, Mouse strain C57BL/6J (56 days, male) 17.5

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