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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
111.1
nTPM
Monaco:
301.6
nTPM
Schmiedel:
71.1
TPM
B-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
111.1
HPA sample
nTPM
Memory B-cell nTPM: 111.1
Samples: 6
Max nTPM: 135.1
Min nTPM: 86.7
P10809_1017
92.2
P10809_1025
135.1
P10809_1044
135.1
P10809_1063
86.7
P10809_1092
115.3
P10809_1105
101.9
Naive B-cell nTPM: 104.9
Samples: 6
Max nTPM: 211.8
Min nTPM: 75.6
P10809_1011
79.1
P10809_1029
85.7
P10809_1048
211.8
P10809_1067
75.6
P10809_1091
99.4
P10809_1104
77.6
B-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
301.6
Monaco sample
nTPM
Exhausted memory B-cell nTPM: 276.9
Samples: 4
Max nTPM: 306.3
Min nTPM: 247.9
RHH5310_R3677
247.9
RHH5218_R3590
306.3
RHH5247_R3619
283.9
RHH5276_R3648
269.6
Naive B-cell nTPM: 246.5
Samples: 4
Max nTPM: 286.7
Min nTPM: 212.5
RHH5308_R3675
212.5
RHH5216_R3588
286.7
RHH5245_R3617
241.3
RHH5274_R3646
245.5
Non-switched memory B-cell nTPM: 301.6
Samples: 4
Max nTPM: 323.2
Min nTPM: 264.6
RHH5309_R3676
314.0
RHH5217_R3589
264.6
RHH5246_R3618
323.2
RHH5275_R3647
304.4
Plasmablast nTPM: 111.3
Samples: 4
Max nTPM: 121.2
Min nTPM: 102.5
RHH5312_R3679
121.2
RHH5220_R3592
108.7
RHH5249_R3621
102.5
RHH5278_R3650
112.9
Switched memory B-cell nTPM: 287.4
Samples: 4
Max nTPM: 308.3
Min nTPM: 244.7
RHH5311_R3678
295.1
RHH5219_R3591
301.3
RHH5248_R3620
308.3
RHH5277_R3649
244.7
B-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
