We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
68.4
nTPM
Monaco:
156.0
nTPM
Schmiedel:
47.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
68.4
HPA sample
nTPM
gdT-cell nTPM: 51.8
Samples: 6
Max nTPM: 70.7
Min nTPM: 39.1
P10809_1007
45.0
P10809_1022
65.0
P10809_1041
43.6
P10809_1060
47.2
P10809_1077
70.7
P10809_1098
39.1
MAIT T-cell nTPM: 60.5
Samples: 6
Max nTPM: 84.4
Min nTPM: 49.5
P10809_1006
59.0
P10809_1024
84.4
P10809_1043
61.6
P10809_1062
49.5
P10809_1083
58.0
P10809_1097
50.2
Memory CD4 T-cell nTPM: 53.8
Samples: 6
Max nTPM: 63.1
Min nTPM: 43.7
P10809_1014
54.5
P10809_1026
63.1
P10809_1045
57.2
P10809_1064
43.7
P10809_1086
55.2
P10809_1113
49.1
Memory CD8 T-cell nTPM: 50.4
Samples: 5
Max nTPM: 57.6
Min nTPM: 45.4
P10809_1012
57.6
P10809_1027
49.3
P10809_1046
46.7
P10809_1065
45.4
P10809_1111
53.1
Naive CD4 T-cell nTPM: 68.4
Samples: 6
Max nTPM: 75.6
Min nTPM: 53.0
P10809_1015
53.0
P10809_1030
75.3
P10809_1049
74.7
P10809_1068
75.6
P10809_1085
66.8
P10809_1112
65.1
Naive CD8 T-cell nTPM: 52.7
Samples: 6
Max nTPM: 66.3
Min nTPM: 34.9
P10809_1016
48.5
P10809_1031
34.9
P10809_1050
59.0
P10809_1069
66.3
P10809_1087
57.1
P10809_1110
50.6
T-reg nTPM: 66.8
Samples: 6
Max nTPM: 105.0
Min nTPM: 40.7
P10809_1018
61.7
P10809_1037
52.2
P10809_1056
81.6
P10809_1075
59.8
P10809_1094
105.0
P10809_1106
40.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
156.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 123.8
Samples: 4
Max nTPM: 136.8
Min nTPM: 113.7
RHH5202_R3573
124.4
RHH5230_R3602
113.7
RHH5259_R3631
120.1
RHH5288_R3660
136.8
Effector memory CD8 T-cell nTPM: 144.0
Samples: 4
Max nTPM: 158.9
Min nTPM: 124.6
RHH5203_R3574
124.6
RHH5231_R3603
158.9
RHH5260_R3632
142.6
RHH5289_R3661
149.8
MAIT T-cell nTPM: 130.3
Samples: 4
Max nTPM: 142.1
Min nTPM: 114.8
RHH5233_R3605
129.3
RHH5205_R3576
134.9
RHH5262_R3634
142.1
RHH5297_R3663
114.8
Memory CD4 T-cell TFH nTPM: 126.4
Samples: 4
Max nTPM: 152.0
Min nTPM: 102.1
RHH5300_R3666
102.1
RHH5236_R3608
123.8
RHH5265_R3637
152.0
RHH5208_R3579
127.8
Memory CD4 T-cell Th1 nTPM: 128.7
Samples: 4
Max nTPM: 147.4
Min nTPM: 116.4
RHH5210_R3581
116.4
RHH5302_R3668
129.5
RHH5238_R3610
121.3
RHH5267_R3639
147.4
Memory CD4 T-cell Th1/Th17 nTPM: 125.9
Samples: 4
Max nTPM: 145.8
Min nTPM: 113.5
RHH5303_R3669
128.6
RHH5211_R3582
115.8
RHH5239_R3611
145.8
RHH5268_R3640
113.5
Memory CD4 T-cell Th17 nTPM: 135.9
Samples: 4
Max nTPM: 175.2
Min nTPM: 109.7
RHH5304_R3670
137.7
RHH5212_R3583
121.1
RHH5240_R3612
175.2
RHH5269_R3641
109.7
Memory CD4 T-cell Th2 nTPM: 122.1
Samples: 4
Max nTPM: 130.9
Min nTPM: 104.4
RHH5305_R3671
122.9
RHH5213_R3584
130.9
RHH5241_R3613
130.1
RHH5270_R3642
104.4
Naive CD4 T-cell nTPM: 131.8
Samples: 4
Max nTPM: 148.2
Min nTPM: 125.7
RHH5306_R3672
126.6
RHH5214_R3585
126.6
RHH5242_R3614
125.7
RHH5271_R3643
148.2
Naive CD8 T-cell nTPM: 144.7
Samples: 4
Max nTPM: 178.4
Min nTPM: 117.6
RHH5201_R3572
178.4
RHH5229_R3601
127.5
RHH5258_R3630
117.6
RHH5287_R3659
155.4
Non-Vd2 gdTCR nTPM: 138.4
Samples: 4
Max nTPM: 152.3
Min nTPM: 116.3
RHH5235_R3607
133.9
RHH5264_R3636
152.3
RHH5207_R3578
151.2
RHH5299_R3665
116.3
T-reg nTPM: 141.0
Samples: 4
Max nTPM: 171.8
Min nTPM: 103.8
RHH5301_R3667
103.8
RHH5237_R3609
140.1
RHH5266_R3638
148.4
RHH5209_R3580
171.8
Terminal effector memory CD4 T-cell nTPM: 156.0
Samples: 2
Max nTPM: 188.7
Min nTPM: 123.2
RHH5243_R3615
188.7
RHH5272_R3644
123.2
Terminal effector memory CD8 T-cell nTPM: 128.9
Samples: 4
Max nTPM: 147.4
Min nTPM: 102.8
RHH5232_R3604
147.4
RHH5204_R3575
102.8
RHH5261_R3633
136.4
RHH5296_R3662
128.8
Vd2 gdTCR nTPM: 128.5
Samples: 4
Max nTPM: 147.5
Min nTPM: 114.5
RHH5234_R3606
124.9
RHH5206_R3577
147.5
RHH5263_R3635
127.0
RHH5298_R3664
114.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
