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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
97.3
nTPM
FANTOM5:
75.4
Scaled Tags Per Million
Pig:
19.0
nTPM
Allen mouse:
4.2
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
97.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 40.2
1984
Male, age 76, both hemispheres
50.3
2188
Female, age 91, both hemispheres
42.2
2301
Female, age 85, both hemispheres
36.0
2090
Male, age 80, both hemispheres
32.3
Dorsal cochlear nucleus nTPM: 24.3
2058
Male, age 76, both hemispheres
34.2
2378
Male, age 80, both hemispheres
27.5
2187
Female, age 91, both hemispheres
22.7
2370
Male, age 61, both hemispheres
19.3
2802
Male, age 74, right hemisphere
17.9
Dorsal tegmental nucleus nTPM: 26.8
1936
Male, age 76, left hemisphere
33.7
2083
Male, age 80, both hemispheres
29.1
2358
Male, age 61, both hemispheres
25.2
2326
Male, age 74, both hemispheres
19.4
Dorsolateral tegmental area nTPM: 17.0
2654
Male, age 80, both hemispheres
26.8
2751
Female, age 85, both hemispheres
18.6
2141
Male, age 76, both hemispheres
15.7
2360
Male, age 74, both hemispheres
15.1
2337
Male, age 61, both hemispheres
8.6
Kolliker-Fuse nucleus nTPM: 39.4
2793
Female, age 91, left hemisphere
45.6
2163
Male, age 80, both hemispheres
43.2
2315
Male, age 76, right hemisphere
29.3
Lateral lemniscal nuclei nTPM: 89.5
2169
Male, age 76, both hemispheres
118.9
2746
Female, age 85, left hemisphere
110.5
2036
Male, age 80, both hemispheres
98.3
2453
Male, age 74, right hemisphere
71.0
2320
Female, age 91, left hemisphere
48.7
Lateral parabrachial nucleus nTPM: 57.9
2139
Female, age 85, right hemisphere
123.2
2013
Male, age 80, both hemispheres
58.6
2790
Male, age 61, both hemispheres
28.5
2792
Male, age 76, both hemispheres
21.1
Lateral vestibular nucleus nTPM: 29.6
2184
Male, age 76, both hemispheres
40.3
2311
Male, age 80, both hemispheres
18.9
Locus coeruleus nTPM: 12.7
2123
Female, age 91, both hemispheres
19.1
2014
Male, age 55, unknown
13.3
2720
Male, age 74, both hemispheres
12.7
2788
Male, age 74, unknown
11.7
2317
Female, age 72, unknown
11.2
2162
Male, age 80, both hemispheres
11.1
1980
Male, age 76, both hemispheres
9.5
Medial parabrachial nucleus nTPM: 29.1
2854
Male, age 80, both hemispheres
56.3
2156
Male, age 61, both hemispheres
26.8
2786
Male, age 76, both hemispheres
22.0
2170
Female, age 91, both hemispheres
21.0
2463
Female, age 85, right hemisphere
19.5
Medial periolivary nuclei nTPM: 87.6
2171
Female, age 85, both hemispheres
162.3
2063
Male, age 76, both hemispheres
124.1
2791
Male, age 74, right hemisphere
56.8
2081
Male, age 80, both hemispheres
52.1
2458
Female, age 91, both hemispheres
42.6
Motor facial nucleus nTPM: 75.4
2062
Male, age 76, both hemispheres
135.4
2697
Female, age 85, both hemispheres
83.2
2327
Male, age 80, both hemispheres
78.0
2365
Male, age 74, right hemisphere
71.5
2795
Female, age 91, both hemispheres
48.3
2126
Male, age 61, both hemispheres
36.1
Motor trigeminal nucleus nTPM: 43.6
2079
Male, age 80, both hemispheres
88.6
2560
Male, age 74, both hemispheres
45.7
2321
Female, age 91, both hemispheres
35.8
2335
Male, age 61, both hemispheres
26.1
2309
Male, age 76, both hemispheres
21.9
Nuclei of the trapezoid body nTPM: 97.3
2735
Female, age 85, both hemispheres
153.2
1983
Male, age 76, both hemispheres
114.6
2159
Male, age 61, both hemispheres
102.8
2166
Male, age 80, both hemispheres
70.0
2368
Female, age 91, both hemispheres
45.9
Nucleus raphe magnus nTPM: 96.4
2172
Female, age 85, both hemispheres
163.4
2160
Male, age 61, both hemispheres
124.1
2051
Male, age 76, both hemispheres
87.4
2455
Male, age 74, both hemispheres
80.5
2328
Male, age 80, both hemispheres
76.1
2459
Female, age 91, both hemispheres
46.9
Paramedian reticular nucleus nTPM: 48.6
2050
Female, age 85, both hemispheres
97.4
2057
Male, age 80, both hemispheres
40.3
2313
Male, age 61, both hemispheres
34.8
2052
Male, age 76, both hemispheres
22.0
Pedunculopontine tegmental nucleus nTPM: 16.5
2338
Male, age 61, both hemispheres
21.0
1921
Female, age 85, both hemispheres
15.0
2334
Male, age 80, both hemispheres
13.5
Pontine nuclei nTPM: 91.7
2787
Female, age 85, both hemispheres
197.7
1968
Male, age 76, left hemisphere
105.6
1863
Male, age 55, unknown
103.4
2727
Male, age 61, right hemisphere
97.7
2109
Female, age 72, unknown
73.7
2115
Male, age 80, left hemisphere
62.6
2454
Male, age 74, left hemisphere
47.9
2319
Female, age 91, both hemispheres
44.6
Pontine raphe nucleus nTPM: 63.4
2122
Female, age 85, midline
108.6
2853
Male, age 76, midline
18.1
Posteroventral cochlear nucleus nTPM: 30.8
2752
Female, age 85, both hemispheres
50.6
2070
Male, age 76, both hemispheres
40.2
2341
Male, age 80, both hemispheres
23.6
2371
Male, age 61, both hemispheres
20.8
2135
Female, age 91, both hemispheres
19.0
Principal sensory trigeminal nucleus nTPM: 71.9
2158
Male, age 61, both hemispheres
109.6
2008
Male, age 80, left hemisphere
105.5
2367
Female, age 91, left hemisphere
44.1
2324
Male, age 76, both hemispheres
28.5
Reticular pontine nucleus, caudal nTPM: 58.3
2332
Male, age 80, right hemisphere
84.0
2092
Male, age 76, both hemispheres
83.7
2457
Female, age 91, both hemispheres
42.6
2559
Male, age 74, both hemispheres
22.9
Reticular pontine nucleus, oral nTPM: 41.2
2012
Female, age 85, both hemispheres
84.0
2361
Male, age 74, both hemispheres
53.1
2366
Female, age 91, both hemispheres
39.1
1939
Male, age 80, both hemispheres
16.7
2167
Male, age 76, both hemispheres
13.1
Reticulotegmental nucleus nTPM: 44.1
2325
Male, age 76, both hemispheres
63.3
2333
Male, age 80, both hemispheres
49.7
2452
Male, age 74, both hemispheres
37.5
2322
Female, age 91, both hemispheres
25.9
Spinal trigeminal nucleus, oral nTPM: 34.6
2737
Female, age 85, both hemispheres
45.1
2164
Male, age 80, both hemispheres
39.4
1978
Male, age 76, both hemispheres
19.2
Subcoeruleus area nTPM: 37.5
2089
Male, age 76, left hemisphere
89.3
1958
Male, age 80, both hemispheres
57.4
2323
Female, age 91, left hemisphere
15.4
2451
Male, age 74, both hemispheres
14.1
2369
Female, age 85, left hemisphere
11.1
Superior olive nTPM: 80.4
1875
Female, age 85, both hemispheres
138.1
2020
Male, age 76, both hemispheres
80.5
2329
Male, age 80, right hemisphere
72.3
2364
Male, age 74, right hemisphere
60.1
2561
Female, age 91, both hemispheres
51.0
Ventral periolivary nuclei nTPM: 94.4
2130
Female, age 85, both hemispheres
137.5
2165
Male, age 80, both hemispheres
105.6
2023
Male, age 76, both hemispheres
70.3
2794
Female, age 91, left hemisphere
64.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 58.0
1959
Male, age 76, both hemispheres
91.0
2449
Male, age 74, both hemispheres
77.5
2161
Male, age 80, both hemispheres
67.5
2840
Female, age 85, both hemispheres
66.5
2456
Female, age 91, both hemispheres
38.3
2359
Male, age 61, both hemispheres
7.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
19.0
Pig sample
Sample description
nTPM
Pons nTPM: 19.0
Samples: 4
Max nTPM: 32.7
Min nTPM: 8.9
Sample A
Female
32.7
Sample B
Female
18.9
Sample C
Male
15.4
Sample D
Male
8.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
