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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
578.6
nTPM
Monaco:
1093.5
nTPM
Schmiedel:
5057.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
578.6
HPA sample
nTPM
gdT-cell nTPM: 344.4
Samples: 6
Max nTPM: 508.4
Min nTPM: 285.4
P10809_1007
297.1
P10809_1022
508.4
P10809_1041
390.2
P10809_1060
292.2
P10809_1077
293.0
P10809_1098
285.4
MAIT T-cell nTPM: 578.6
Samples: 6
Max nTPM: 864.7
Min nTPM: 425.0
P10809_1006
531.8
P10809_1024
864.7
P10809_1043
554.9
P10809_1062
546.3
P10809_1083
425.0
P10809_1097
548.7
Memory CD4 T-cell nTPM: 381.3
Samples: 6
Max nTPM: 439.9
Min nTPM: 328.9
P10809_1014
374.9
P10809_1026
411.3
P10809_1045
439.9
P10809_1064
337.0
P10809_1086
328.9
P10809_1113
395.6
Memory CD8 T-cell nTPM: 394.9
Samples: 5
Max nTPM: 426.8
Min nTPM: 345.7
P10809_1012
426.8
P10809_1027
418.7
P10809_1046
403.6
P10809_1065
345.7
P10809_1111
379.8
Naive CD4 T-cell nTPM: 510.6
Samples: 6
Max nTPM: 593.6
Min nTPM: 433.6
P10809_1015
476.3
P10809_1030
547.8
P10809_1049
521.4
P10809_1068
593.6
P10809_1085
433.6
P10809_1112
491.1
Naive CD8 T-cell nTPM: 495.4
Samples: 6
Max nTPM: 579.5
Min nTPM: 298.9
P10809_1016
579.5
P10809_1031
573.2
P10809_1050
508.9
P10809_1069
477.0
P10809_1087
298.9
P10809_1110
534.6
T-reg nTPM: 327.7
Samples: 6
Max nTPM: 395.2
Min nTPM: 278.7
P10809_1018
293.0
P10809_1037
395.2
P10809_1056
341.1
P10809_1075
322.7
P10809_1094
335.2
P10809_1106
278.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1093.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 787.4
Samples: 4
Max nTPM: 844.7
Min nTPM: 641.8
RHH5202_R3573
830.1
RHH5230_R3602
844.7
RHH5259_R3631
832.8
RHH5288_R3660
641.8
Effector memory CD8 T-cell nTPM: 777.5
Samples: 4
Max nTPM: 895.7
Min nTPM: 716.7
RHH5203_R3574
758.1
RHH5231_R3603
716.7
RHH5260_R3632
895.7
RHH5289_R3661
739.4
MAIT T-cell nTPM: 1034.4
Samples: 4
Max nTPM: 1377.4
Min nTPM: 806.0
RHH5233_R3605
980.8
RHH5205_R3576
1377.4
RHH5262_R3634
973.4
RHH5297_R3663
806.0
Memory CD4 T-cell TFH nTPM: 735.7
Samples: 4
Max nTPM: 904.2
Min nTPM: 555.3
RHH5300_R3666
555.3
RHH5236_R3608
904.2
RHH5265_R3637
651.2
RHH5208_R3579
832.1
Memory CD4 T-cell Th1 nTPM: 650.4
Samples: 4
Max nTPM: 761.6
Min nTPM: 543.9
RHH5210_R3581
761.6
RHH5302_R3668
543.9
RHH5238_R3610
628.5
RHH5267_R3639
667.7
Memory CD4 T-cell Th1/Th17 nTPM: 846.2
Samples: 4
Max nTPM: 951.2
Min nTPM: 753.6
RHH5303_R3669
759.5
RHH5211_R3582
951.2
RHH5239_R3611
920.5
RHH5268_R3640
753.6
Memory CD4 T-cell Th17 nTPM: 866.0
Samples: 4
Max nTPM: 1029.6
Min nTPM: 718.2
RHH5304_R3670
807.2
RHH5212_R3583
909.1
RHH5240_R3612
1029.6
RHH5269_R3641
718.2
Memory CD4 T-cell Th2 nTPM: 747.1
Samples: 4
Max nTPM: 978.9
Min nTPM: 648.7
RHH5305_R3671
670.4
RHH5213_R3584
978.9
RHH5241_R3613
690.3
RHH5270_R3642
648.7
Naive CD4 T-cell nTPM: 766.0
Samples: 4
Max nTPM: 951.4
Min nTPM: 670.9
RHH5306_R3672
670.9
RHH5214_R3585
951.4
RHH5242_R3614
674.7
RHH5271_R3643
767.0
Naive CD8 T-cell nTPM: 1093.5
Samples: 4
Max nTPM: 1320.7
Min nTPM: 951.3
RHH5201_R3572
1140.1
RHH5229_R3601
1320.7
RHH5258_R3630
962.0
RHH5287_R3659
951.3
Non-Vd2 gdTCR nTPM: 676.2
Samples: 4
Max nTPM: 765.9
Min nTPM: 488.6
RHH5235_R3607
703.5
RHH5264_R3636
765.9
RHH5207_R3578
746.6
RHH5299_R3665
488.6
T-reg nTPM: 781.6
Samples: 4
Max nTPM: 1023.1
Min nTPM: 547.1
RHH5301_R3667
547.1
RHH5237_R3609
815.9
RHH5266_R3638
740.2
RHH5209_R3580
1023.1
Terminal effector memory CD4 T-cell nTPM: 585.7
Samples: 2
Max nTPM: 608.7
Min nTPM: 562.6
RHH5243_R3615
562.6
RHH5272_R3644
608.7
Terminal effector memory CD8 T-cell nTPM: 682.6
Samples: 4
Max nTPM: 868.0
Min nTPM: 591.3
RHH5232_R3604
650.2
RHH5204_R3575
620.8
RHH5261_R3633
868.0
RHH5296_R3662
591.3
Vd2 gdTCR nTPM: 873.3
Samples: 4
Max nTPM: 1163.7
Min nTPM: 625.0
RHH5234_R3606
946.7
RHH5206_R3577
757.7
RHH5263_R3635
1163.7
RHH5298_R3664
625.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.