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HSP90AB1
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Gene name
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Tissue
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Expression
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Category
Cluster
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In atlas
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  • HSP90AB1
INTERACTION
Protein interactions
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

HSP90AB1
Gene descriptioni

Full gene name according to HGNC.

Heat shock protein 90 alpha family class B member 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Cancer-related genes
Plasma proteins
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
HUMAN PROTEIN ATLAS INFORMATIONi

Summary of data presented in the Tissue section, with a representative image of protein expression (left) and an interactive chart showing the tissue-specific mRNA expression (right). The image and the chart are clickable and will redirect to more Tissue data.
This section contains information regarding the expression profiles of protein-coding genes in normal human tissue, both on the mRNA and protein level. The protein expression data is derived from antibody-based protein profiling using immunohistochemistry.

Tissue expression
cluster (RNA)i

The RNA data was used to cluster genes according to their expression across tissues. Clusters contain genes that have similar expression patterns, and each cluster has been manually annotated to describe common features in terms of function and specificity.

Skeletal muscle - Muscle contraction (mainly)
Tissue specificity (RNA)i

The RNA specificity category is based on mRNA expression levels in the consensus dataset which is calculated from the RNA expression levels in samples from HPA and GTEX. The categories include: tissue enriched, group enriched, tissue enhanced, low tissue specificity and not detected.

Low tissue specificity
Tau specificity score (RNA)i

Tau specificity score is a numerical indicator of the specificity of the gene expression across cells or tissues. The value ranges from 0 and 1, where 0 indicates identical expression across all cells/tissue types, while 1 indicates expression in a single cell/tissue type.

0.13
Tissue distribution (RNA)i

The RNA distribution category is based on mRNA expression levels in the analyzed samples based on a combination of data from HPA and GTEX. The categories include: detected in all, detected in many, detected in some, detected in single and not detected.

Detected in all
Protein evidencei

Evidence score for genes based on UniProt protein existence (UniProt evidence); neXtProt protein existence (neXtProt evidence);and a Human Protein Atlas antibody- or RNA based score (HPA evidence). The avaliable scores are evidence at protein level, evidence at transcript level, no evidence, or not avaliable.

Read more
Evidence at protein level
Subcellular locationi

Main subcellular location based on data generated in the subcellular section of the Human Protein Atlas.

Localized to the Cytosol
Secretome annotationi

All genes with at least one predicted secreted isoform have been annotated and classified with the aim to determine if the corresponding protein(s) are:

  • secreted into blood
  • locally secreted
  • or actually being attached to membrane or retained in intracellular locations like mitochondria, endoplasmatic reticulum (ER), Golgi apparatus or lysosomes.

Not available
INTERACTION SUMMARYi

In the Interaction summary a network plot of the gene's interaction partners is shown with nodes representing genes and edges representing the interaction type and the confidence (MI score) for the interaction. The type of interaction (direct interaction or physical association) is reflected by the colour of the edges, while the confidence of the interaction is reflected by the thickness of the edges. Scores larger than 0.6 (high confidence) have a thicker line than scores between 0.45 and 0.6 (medium confidence).

The highlight bar in the top of the plot can be used to colour the nodes according to subcellular location (based on data in the Subcellular section), predicted location (based on signalpeptide and transmembrane region predictions), tissue specificity (based on RNA tissue expression profiles) or proteinclass.

Nodes can also be highlighted using the top left Filter option in which a query of choice can be built to for example label all nodes that are tissue enriched in both human and mouse brain or those that belongs to a certain tissue expression cluster. The expression cluster for the gene is stated in the box Human Protein Atlas Information above the network plot. Click on Filter in the top left in the plot to find the query builder and some example queries.

Highlight:
Off
Subcell location
Predicted location
Tissue specificity
Protein class

Filter menu »
Fields »
e.g. Brain enriched, Localized to mitochondria, Skeletal muscle - Muscle contraction

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Cluster
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Interacting gene
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


Number of interactions: 137 View all protein interaction data in IntAct
Interaction Interaction type Confidence MI score # Interactions
EGFR Physical association High 0.89 270
CDC37 Physical association High 0.89 124
PPP5C Direct interaction High 0.87 15
RAF1 Physical association High 0.86 40
FKBP5 Direct interaction High 0.85 11
AIP Direct interaction High 0.83 5
ARAF Physical association High 0.81 14
CHORDC1 Physical association High 0.8 3
FKBP4 Direct interaction High 0.79 10
ERBB2 Physical association High 0.79 49
AURKB Physical association High 0.78 17
CDK4 Physical association High 0.78 24
MAP3K14 Physical association High 0.76 39
PTGES3 Direct interaction High 0.74 6
CDC37L1 Physical association High 0.74 3
STUB1 Direct interaction High 0.74 54
FYN Physical association High 0.72 46
STK11 Physical association High 0.72 15
AHSA1 Direct interaction High 0.7 4
STIP1 Direct interaction High 0.69 19
TTC4 Direct interaction High 0.68 5
BLK Physical association High 0.67 22
BRAF Physical association High 0.67 14
CDK9 Physical association High 0.67 13
FGFR1 Physical association High 0.67 13
HCK Physical association High 0.67 17
IKBKG Physical association High 0.67 57
ITK Physical association High 0.67 4
MAP2K5 Physical association High 0.67 10
MAP4K1 Physical association High 0.67 9
MYLK4 Physical association High 0.67 1
PDIK1L Physical association High 0.67 5
PSKH2 Physical association High 0.67 3
RPS6KA1 Physical association High 0.67 7
STYK1 Physical association High 0.67 2
TSSK6 Physical association High 0.67 3
FGFR3 Physical association High 0.67 192
CHEK1 Physical association High 0.66 7
MAP3K8 Physical association High 0.66 5
GSK3A Physical association High 0.65 12
CDK10 Physical association High 0.64 3
CILK1 Physical association High 0.64 3
CUL3 Physical association High 0.64 36
DDR2 Physical association High 0.64 6
FGR Physical association High 0.64 2
FLT4 Physical association High 0.64 2
KLHL38 Physical association High 0.64 72
LCK Physical association High 0.64 29
LIMK2 Physical association High 0.64 2
MAPK4 Physical association High 0.64 1
PRKCE Physical association High 0.64 8
PRKX Physical association High 0.64 4
PSKH1 Physical association High 0.64 1
TESK2 Physical association High 0.64 1
INSRR Physical association High 0.6 2
NTRK1 Physical association High 0.6 6
IKBKE Physical association Medium 0.59 19
RIPK1 Physical association Medium 0.59 17
TBK1 Physical association Medium 0.59 30
AGO1 Physical association Medium 0.56 9
AKT1 Physical association Medium 0.56 58
AXL Physical association Medium 0.56 3
BMX Physical association Medium 0.56 4
CAMK2A Physical association Medium 0.56 52
CDK3 Physical association Medium 0.56 19
CDK7 Physical association Medium 0.56 6
CLK3 Physical association Medium 0.56 34
CSNK1A1 Physical association Medium 0.56 18
CUL1 Physical association Medium 0.56 31
CUL2 Physical association Medium 0.56 13
CUL4A Physical association Medium 0.56 12
CUL4B Physical association Medium 0.56 12
DYRK1B Physical association Medium 0.56 10
DYRK4 Physical association Medium 0.56 4
EIF2AK1 Physical association Medium 0.56 2
ERBB3 Physical association Medium 0.56 19
FBXL2 Physical association Medium 0.56 3
FBXO24 Physical association Medium 0.56 2
FBXW2 Physical association Medium 0.56 9
FER Physical association Medium 0.56 3
GRK6 Physical association Medium 0.56 2
GRK7 Physical association Medium 0.56 1
HIPK4 Physical association Medium 0.56 2
ILK Physical association Medium 0.56 18
LYN Physical association Medium 0.56 29
MAP2K7 Physical association Medium 0.56 4
MAPK15 Physical association Medium 0.56 2
MOS Physical association Medium 0.56 46
MYLK2 Physical association Medium 0.56 4
MYO3B Physical association Medium 0.56 1
NEK11 Physical association Medium 0.56 2
NEK8 Physical association Medium 0.56 12
PRKAA1 Physical association Medium 0.56 33
PRKACB Physical association Medium 0.56 5
PRKCG Physical association Medium 0.56 5
PRKN Physical association Medium 0.56 11
PTK6 Physical association Medium 0.56 22
RPS6KA3 Physical association Medium 0.56 6
SGK2 Physical association Medium 0.56 1
STK32C Physical association Medium 0.56 2
TNK2 Physical association Medium 0.56 12
TSSK1B Physical association Medium 0.56 5
TSSK2 Physical association Medium 0.56 5
TYRO3 Physical association Medium 0.56 13
YES1 Physical association Medium 0.56 44
MAGEB6 Physical association Medium 0.56 12
FAM162A Physical association Medium 0.54 2
IKBKB Physical association Medium 0.54 20
TRAF2 Physical association Medium 0.54 237
ACVR1B Physical association Medium 0.52 3
AKT2 Physical association Medium 0.52 4
ALK Physical association Medium 0.52 5
AMHR2 Physical association Medium 0.52 2
BTK Physical association Medium 0.52 12
CAMK2G Physical association Medium 0.52 2
CDK14 Physical association Medium 0.52 8
CDK15 Physical association Medium 0.52 2
CDK6 Physical association Medium 0.52 15
CSNK1E Physical association Medium 0.52 16
EPHA2 Physical association Medium 0.52 11
ERBB4 Physical association Medium 0.52 14
HASPIN Physical association Medium 0.52 3
MAP3K9 Physical association Medium 0.52 4
MATK Physical association Medium 0.52 6
MUSK Physical association Medium 0.52 2
NEK9 Physical association Medium 0.52 12
NR1I2 Physical association Medium 0.52 2
POGK Physical association Medium 0.52 1
PRKCZ Physical association Medium 0.52 14
PRKD1 Physical association Medium 0.52 6
RGS6 Physical association Medium 0.52 1
ROR2 Physical association Medium 0.52 24
STK38 Physical association Medium 0.52 8
TYK2 Physical association Medium 0.52 13
AMPD3 Physical association Medium 0.5 1
RPL11 Physical association Medium 0.5 8
UNC45B Physical association Medium 0.5 1
Show allShow less
METABOLIC SUMMARYi

In this summary the pathway/subsystems to which the gene belongs is shown together with the associated cellular compartment for the reactions based on metabolite information. The number of proteins and metabolites in the pathway is shown as well as the number of reactions for the selected gene. By clicking on a pathway in the summary table the associated metabolic network map is shown, together with a gene-tissue heatmap that shows the expression of genes in that pathway in different tissues.

HSP90AB1 is not a metabolic protein

Contact

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


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