HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:252.7 nTPM
HPA Brain:144.5 nTPM
GTEx:252.7 nTPM
FANTOM5:73.6 Scaled Tags Per Million
Pig:122.0 nTPM
Mouse:194.8 nTPM
Allen mouse:13.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002817
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 144.5
Sample id Sample description nTPM
Hippocampus
nTPM: 135.3
1898 Male, age 80, left hemisphere 167.3
2529 Female, age 94, left hemisphere 152.4
1911 Female, age 85, right hemisphere 126.0
2621 Female, age 67, right hemisphere 125.3
1855 Male, age 76, left hemisphere 124.5
2148 Female, age 91, left hemisphere 116.3
Dentate gyrus
nTPM: 135.9
2530 Female, age 94, left hemisphere 157.8
2528 Male, age 74, both hemispheres 140.8
1927 Female, age 91, both hemispheres 137.3
2010 Male, age 76, both hemispheres 135.0
2246 Female, age 85, both hemispheres 130.4
2531 Female, age 67, both hemispheres 114.2
Entorhinal gyrus
nTPM: 134.5
2764 Male, age 80, right hemisphere 166.5
1787 Male, age 76, left hemisphere 148.2
1938 Female, age 85, left hemisphere 140.4
2117 Female, age 91, right hemisphere 135.9
2613 Female, age 94, left hemisphere 110.7
2686 Male, age 75, right hemisphere 105.2
Hippocampus, CA1
nTPM: 144.5
2749 Male, age 80, left hemisphere 197.9
2527 Male, age 74, both hemispheres 149.6
2082 Female, age 91, right hemisphere 129.5
1873 Female, age 85, both hemispheres 123.9
2045 Male, age 76, both hemispheres 121.4
Hippocampus, CA2
nTPM: 139.6
2249 Male, age 74, both hemispheres 163.5
1963 Male, age 80, left hemisphere 153.1
2437 Female, age 94, left hemisphere 148.1
1892 Male, age 76, both hemispheres 142.3
2113 Female, age 91, right hemisphere 121.9
1940 Female, age 85, left hemisphere 108.8
Hippocampus, CA3
nTPM: 133.2
2436 Male, age 74, both hemispheres 166.6
1867 Male, age 76, both hemispheres 140.5
2137 Male, age 80, left hemisphere 138.7
2620 Female, age 94, left hemisphere 122.5
1891 Female, age 85, both hemispheres 116.2
2861 Female, age 67, both hemispheres 114.6
Parahippocampal cortex
nTPM: 130.4
2245 Female, age 91, both hemispheres 156.2
2250 Female, age 67, right hemisphere 152.7
1933 Female, age 85, both hemispheres 144.7
1990 Female, age 91, right hemisphere 134.4
1850 Male, age 80, both hemispheres 133.4
2018 Male, age 76, both hemispheres 127.6
2532 Female, age 72, left hemisphere 120.1
2692 Male, age 74, both hemispheres 114.9
2622 Female, age 67, right hemisphere 112.4
2693 Female, age 94, both hemispheres 108.0
Perirhinal gyrus
nTPM: 143.8
1794 Male, age 80, right hemisphere 167.3
1847 Female, age 91, left hemisphere 163.3
1841 Female, age 85, right hemisphere 141.7
2521 Female, age 94, right hemisphere 127.6
2848 Male, age 76, right hemisphere 119.0
Subiculum
nTPM: 136.3
1977 Female, age 85, both hemispheres 156.2
2619 Male, age 74, both hemispheres 145.8
1901 Male, age 80, both hemispheres 144.9
2438 Female, age 94, left hemisphere 126.9
2042 Male, age 76, both hemispheres 124.7
2729 Female, age 91, right hemisphere 119.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 252.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 252.7
Samples: 197

Max nTPM: 631.4
Min nTPM: 79.0
Std nTPM: 71.9
Median nTPM: 241.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 631.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 534.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 528.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 471.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 440.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 423.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 418.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 410.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 407.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 395.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 378.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 73.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 73.6
FF:10169-103B7 60 years, female 81.0
FF:10153-102I9 76 years, female 66.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 122.0
Pig sample Sample description nTPM
Subiculum
nTPM: 89.3
Samples: 4

Max nTPM: 131.2
Min nTPM: 68.1
Sample A Female 131.2
Sample B Female 84.1
Sample C Male 73.6
Sample D Male 68.1
Dorsal hippocampus
nTPM: 122.1
Samples: 4

Max nTPM: 169.2
Min nTPM: 85.0
Sample A Female 169.2
Sample B Female 116.7
Sample C Male 117.3
Sample D Male 85.0
Entorhinal cortex
nTPM: 101.1
Samples: 4

Max nTPM: 135.6
Min nTPM: 71.4
Sample A Female 94.8
Sample B Female 135.6
Sample C Male 102.6
Sample D Male 71.4
Ventral hippocampus
nTPM: 106.9
Samples: 4

Max nTPM: 123.7
Min nTPM: 81.6
Sample A Female 123.0
Sample B Female 81.6
Sample C Male 123.7
Sample D Male 99.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 194.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 194.8
Samples: 4

Max nTPM: 199.9
Min nTPM: 189.6
Sample A Male 189.6
Sample B Male 190.9
Sample C Female 199.9
Sample D Female 198.7
Hippocampal formation
nTPM: 192.7
Samples: 4

Max nTPM: 220.5
Min nTPM: 180.1
Sample A Male 190.0
Sample B Male 180.1
Sample C Female 180.2
Sample D Female 220.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.5
68545312 Antisense, RP_050118_03_C01, Mouse strain C57BL/6J (56 days, male) 13.5

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