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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
177.2
nTPM
FANTOM5:
104.1
Scaled Tags Per Million
Pig:
171.8
nTPM
Allen mouse:
7.6
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
177.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 145.7
2301
Female, age 85, both hemispheres
156.7
1984
Male, age 76, both hemispheres
147.3
2090
Male, age 80, both hemispheres
147.1
2188
Female, age 91, both hemispheres
131.8
Dorsal cochlear nucleus nTPM: 162.9
2802
Male, age 74, right hemisphere
189.6
2187
Female, age 91, both hemispheres
175.3
2370
Male, age 61, both hemispheres
160.9
2058
Male, age 76, both hemispheres
149.0
2378
Male, age 80, both hemispheres
139.7
Dorsal tegmental nucleus nTPM: 159.6
2083
Male, age 80, both hemispheres
177.9
2326
Male, age 74, both hemispheres
164.8
2358
Male, age 61, both hemispheres
157.8
1936
Male, age 76, left hemisphere
137.9
Dorsolateral tegmental area nTPM: 160.8
2751
Female, age 85, both hemispheres
182.7
2654
Male, age 80, both hemispheres
172.3
2337
Male, age 61, both hemispheres
159.9
2141
Male, age 76, both hemispheres
144.9
2360
Male, age 74, both hemispheres
144.4
Kolliker-Fuse nucleus nTPM: 149.7
2163
Male, age 80, both hemispheres
175.5
2315
Male, age 76, right hemisphere
142.0
2793
Female, age 91, left hemisphere
131.6
Lateral lemniscal nuclei nTPM: 137.9
2169
Male, age 76, both hemispheres
180.3
2746
Female, age 85, left hemisphere
144.6
2453
Male, age 74, right hemisphere
134.2
2320
Female, age 91, left hemisphere
123.2
2036
Male, age 80, both hemispheres
107.0
Lateral parabrachial nucleus nTPM: 143.8
2139
Female, age 85, right hemisphere
160.2
2013
Male, age 80, both hemispheres
153.9
2790
Male, age 61, both hemispheres
145.6
2792
Male, age 76, both hemispheres
115.3
Lateral vestibular nucleus nTPM: 175.9
2311
Male, age 80, both hemispheres
176.2
2184
Male, age 76, both hemispheres
175.7
Locus coeruleus nTPM: 152.5
2123
Female, age 91, both hemispheres
185.0
2014
Male, age 55, unknown
162.4
1980
Male, age 76, both hemispheres
158.3
2720
Male, age 74, both hemispheres
157.3
2162
Male, age 80, both hemispheres
148.5
2317
Female, age 72, unknown
144.7
2788
Male, age 74, unknown
111.0
Medial parabrachial nucleus nTPM: 177.2
2170
Female, age 91, both hemispheres
244.2
2463
Female, age 85, right hemisphere
176.2
2156
Male, age 61, both hemispheres
175.3
2854
Male, age 80, both hemispheres
148.6
2786
Male, age 76, both hemispheres
141.7
Medial periolivary nuclei nTPM: 144.7
2063
Male, age 76, both hemispheres
184.8
2171
Female, age 85, both hemispheres
175.6
2081
Male, age 80, both hemispheres
124.8
2791
Male, age 74, right hemisphere
119.3
2458
Female, age 91, both hemispheres
119.1
Motor facial nucleus nTPM: 144.8
2062
Male, age 76, both hemispheres
207.2
2126
Male, age 61, both hemispheres
149.2
2365
Male, age 74, right hemisphere
136.4
2697
Female, age 85, both hemispheres
132.6
2327
Male, age 80, both hemispheres
128.2
2795
Female, age 91, both hemispheres
115.0
Motor trigeminal nucleus nTPM: 148.7
2335
Male, age 61, both hemispheres
166.9
2309
Male, age 76, both hemispheres
151.1
2321
Female, age 91, both hemispheres
145.0
2560
Male, age 74, both hemispheres
140.7
2079
Male, age 80, both hemispheres
139.6
Nuclei of the trapezoid body nTPM: 166.6
1983
Male, age 76, both hemispheres
217.8
2735
Female, age 85, both hemispheres
173.8
2159
Male, age 61, both hemispheres
173.0
2166
Male, age 80, both hemispheres
149.9
2368
Female, age 91, both hemispheres
118.6
Nucleus raphe magnus nTPM: 154.6
2172
Female, age 85, both hemispheres
168.7
2160
Male, age 61, both hemispheres
166.6
2455
Male, age 74, both hemispheres
166.3
2051
Male, age 76, both hemispheres
160.7
2328
Male, age 80, both hemispheres
145.2
2459
Female, age 91, both hemispheres
120.1
Paramedian reticular nucleus nTPM: 156.1
2057
Male, age 80, both hemispheres
175.9
2313
Male, age 61, both hemispheres
165.5
2050
Female, age 85, both hemispheres
165.4
2052
Male, age 76, both hemispheres
117.4
Pedunculopontine tegmental nucleus nTPM: 154.9
2334
Male, age 80, both hemispheres
166.6
2338
Male, age 61, both hemispheres
151.9
1921
Female, age 85, both hemispheres
146.2
Pontine nuclei nTPM: 161.8
1863
Male, age 55, unknown
197.2
2787
Female, age 85, both hemispheres
191.9
1968
Male, age 76, left hemisphere
181.9
2109
Female, age 72, unknown
165.6
2454
Male, age 74, left hemisphere
155.7
2727
Male, age 61, right hemisphere
147.7
2319
Female, age 91, both hemispheres
129.8
2115
Male, age 80, left hemisphere
124.9
Pontine raphe nucleus nTPM: 152.2
2122
Female, age 85, midline
163.9
2853
Male, age 76, midline
140.5
Posteroventral cochlear nucleus nTPM: 146.9
2752
Female, age 85, both hemispheres
172.5
2371
Male, age 61, both hemispheres
168.3
2070
Male, age 76, both hemispheres
146.0
2341
Male, age 80, both hemispheres
126.9
2135
Female, age 91, both hemispheres
120.8
Principal sensory trigeminal nucleus nTPM: 153.6
2158
Male, age 61, both hemispheres
173.7
2324
Male, age 76, both hemispheres
167.1
2008
Male, age 80, left hemisphere
144.3
2367
Female, age 91, left hemisphere
129.3
Reticular pontine nucleus, caudal nTPM: 153.6
2559
Male, age 74, both hemispheres
181.3
2092
Male, age 76, both hemispheres
166.8
2332
Male, age 80, right hemisphere
140.7
2457
Female, age 91, both hemispheres
125.8
Reticular pontine nucleus, oral nTPM: 160.6
2167
Male, age 76, both hemispheres
178.1
1939
Male, age 80, both hemispheres
173.5
2361
Male, age 74, both hemispheres
168.1
2012
Female, age 85, both hemispheres
150.2
2366
Female, age 91, both hemispheres
133.1
Reticulotegmental nucleus nTPM: 162.5
2452
Male, age 74, both hemispheres
170.5
2322
Female, age 91, both hemispheres
169.8
2325
Male, age 76, both hemispheres
157.6
2333
Male, age 80, both hemispheres
152.4
Spinal trigeminal nucleus, oral nTPM: 155.9
2164
Male, age 80, both hemispheres
165.5
2737
Female, age 85, both hemispheres
151.5
1978
Male, age 76, both hemispheres
150.7
Subcoeruleus area nTPM: 148.9
2369
Female, age 85, left hemisphere
155.5
2323
Female, age 91, left hemisphere
152.7
1958
Male, age 80, both hemispheres
151.4
2451
Male, age 74, both hemispheres
149.2
2089
Male, age 76, left hemisphere
135.5
Superior olive nTPM: 140.7
2020
Male, age 76, both hemispheres
150.6
2364
Male, age 74, right hemisphere
150.4
1875
Female, age 85, both hemispheres
143.4
2561
Female, age 91, both hemispheres
130.0
2329
Male, age 80, right hemisphere
129.3
Ventral periolivary nuclei nTPM: 139.6
2130
Female, age 85, both hemispheres
164.2
2165
Male, age 80, both hemispheres
162.5
2023
Male, age 76, both hemispheres
125.7
2794
Female, age 91, left hemisphere
106.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 140.4
1959
Male, age 76, both hemispheres
157.2
2449
Male, age 74, both hemispheres
142.8
2161
Male, age 80, both hemispheres
141.5
2840
Female, age 85, both hemispheres
140.6
2359
Male, age 61, both hemispheres
136.6
2456
Female, age 91, both hemispheres
123.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
171.8
Pig sample
Sample description
nTPM
Pons nTPM: 171.8
Samples: 4
Max nTPM: 212.2
Min nTPM: 115.8
Sample A
Female
212.2
Sample B
Female
115.8
Sample C
Male
178.7
Sample D
Male
180.4
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
