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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
247.4
nTPM
FANTOM5:
26.0
Scaled Tags Per Million
Pig:
100.8
nTPM
Allen mouse:
9.4
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
247.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 203.6
2301
Female, age 85, both hemispheres
284.8
1984
Male, age 76, both hemispheres
197.0
2090
Male, age 80, both hemispheres
175.5
2188
Female, age 91, both hemispheres
157.3
Dorsal cochlear nucleus nTPM: 207.2
2802
Male, age 74, right hemisphere
259.3
2378
Male, age 80, both hemispheres
207.0
2370
Male, age 61, both hemispheres
197.2
2187
Female, age 91, both hemispheres
190.4
2058
Male, age 76, both hemispheres
182.1
Dorsal tegmental nucleus nTPM: 191.1
2083
Male, age 80, both hemispheres
266.6
2326
Male, age 74, both hemispheres
196.2
1936
Male, age 76, left hemisphere
170.5
2358
Male, age 61, both hemispheres
131.3
Dorsolateral tegmental area nTPM: 180.5
2654
Male, age 80, both hemispheres
241.5
2751
Female, age 85, both hemispheres
225.9
2337
Male, age 61, both hemispheres
171.0
2141
Male, age 76, both hemispheres
143.0
2360
Male, age 74, both hemispheres
121.3
Kolliker-Fuse nucleus nTPM: 176.2
2793
Female, age 91, left hemisphere
227.1
2163
Male, age 80, both hemispheres
199.1
2315
Male, age 76, right hemisphere
102.5
Lateral lemniscal nuclei nTPM: 243.1
2453
Male, age 74, right hemisphere
283.6
2320
Female, age 91, left hemisphere
256.3
2169
Male, age 76, both hemispheres
243.4
2036
Male, age 80, both hemispheres
234.2
2746
Female, age 85, left hemisphere
197.7
Lateral parabrachial nucleus nTPM: 169.3
2139
Female, age 85, right hemisphere
202.6
2790
Male, age 61, both hemispheres
201.6
2013
Male, age 80, both hemispheres
168.5
2792
Male, age 76, both hemispheres
104.4
Lateral vestibular nucleus nTPM: 220.6
2184
Male, age 76, both hemispheres
228.7
2311
Male, age 80, both hemispheres
212.5
Locus coeruleus nTPM: 133.2
2123
Female, age 91, both hemispheres
172.6
2162
Male, age 80, both hemispheres
162.7
2720
Male, age 74, both hemispheres
150.5
2317
Female, age 72, unknown
135.0
2014
Male, age 55, unknown
116.4
1980
Male, age 76, both hemispheres
111.5
2788
Male, age 74, unknown
83.6
Medial parabrachial nucleus nTPM: 211.0
2156
Male, age 61, both hemispheres
227.4
2786
Male, age 76, both hemispheres
217.7
2463
Female, age 85, right hemisphere
213.0
2170
Female, age 91, both hemispheres
207.2
2854
Male, age 80, both hemispheres
189.6
Medial periolivary nuclei nTPM: 211.1
2171
Female, age 85, both hemispheres
244.6
2458
Female, age 91, both hemispheres
228.8
2063
Male, age 76, both hemispheres
219.4
2081
Male, age 80, both hemispheres
184.1
2791
Male, age 74, right hemisphere
178.8
Motor facial nucleus nTPM: 228.8
2062
Male, age 76, both hemispheres
253.3
2795
Female, age 91, both hemispheres
246.6
2126
Male, age 61, both hemispheres
232.6
2327
Male, age 80, both hemispheres
229.0
2365
Male, age 74, right hemisphere
223.6
2697
Female, age 85, both hemispheres
188.0
Motor trigeminal nucleus nTPM: 221.8
2560
Male, age 74, both hemispheres
300.1
2321
Female, age 91, both hemispheres
252.2
2335
Male, age 61, both hemispheres
188.9
2309
Male, age 76, both hemispheres
187.4
2079
Male, age 80, both hemispheres
180.6
Nuclei of the trapezoid body nTPM: 236.4
2368
Female, age 91, both hemispheres
259.0
1983
Male, age 76, both hemispheres
244.7
2159
Male, age 61, both hemispheres
235.9
2735
Female, age 85, both hemispheres
233.4
2166
Male, age 80, both hemispheres
209.2
Nucleus raphe magnus nTPM: 238.0
2455
Male, age 74, both hemispheres
255.0
2172
Female, age 85, both hemispheres
247.1
2459
Female, age 91, both hemispheres
246.5
2328
Male, age 80, both hemispheres
245.9
2051
Male, age 76, both hemispheres
217.5
2160
Male, age 61, both hemispheres
215.8
Paramedian reticular nucleus nTPM: 192.0
2057
Male, age 80, both hemispheres
217.8
2050
Female, age 85, both hemispheres
213.9
2313
Male, age 61, both hemispheres
211.8
2052
Male, age 76, both hemispheres
124.4
Pedunculopontine tegmental nucleus nTPM: 149.8
2334
Male, age 80, both hemispheres
173.2
1921
Female, age 85, both hemispheres
153.4
2338
Male, age 61, both hemispheres
122.7
Pontine nuclei nTPM: 228.3
2787
Female, age 85, both hemispheres
278.9
1968
Male, age 76, left hemisphere
260.4
2115
Male, age 80, left hemisphere
237.1
2454
Male, age 74, left hemisphere
224.0
1863
Male, age 55, unknown
223.3
2109
Female, age 72, unknown
222.2
2727
Male, age 61, right hemisphere
204.2
2319
Female, age 91, both hemispheres
176.6
Pontine raphe nucleus nTPM: 145.5
2122
Female, age 85, midline
166.7
2853
Male, age 76, midline
124.4
Posteroventral cochlear nucleus nTPM: 168.0
2341
Male, age 80, both hemispheres
204.8
2752
Female, age 85, both hemispheres
197.6
2070
Male, age 76, both hemispheres
178.9
2371
Male, age 61, both hemispheres
160.6
2135
Female, age 91, both hemispheres
97.9
Principal sensory trigeminal nucleus nTPM: 206.9
2158
Male, age 61, both hemispheres
230.2
2324
Male, age 76, both hemispheres
207.1
2008
Male, age 80, left hemisphere
195.3
2367
Female, age 91, left hemisphere
195.0
Reticular pontine nucleus, caudal nTPM: 247.4
2457
Female, age 91, both hemispheres
277.7
2559
Male, age 74, both hemispheres
253.5
2332
Male, age 80, right hemisphere
247.2
2092
Male, age 76, both hemispheres
211.3
Reticular pontine nucleus, oral nTPM: 205.5
2361
Male, age 74, both hemispheres
243.3
1939
Male, age 80, both hemispheres
214.7
2012
Female, age 85, both hemispheres
201.0
2366
Female, age 91, both hemispheres
187.9
2167
Male, age 76, both hemispheres
180.3
Reticulotegmental nucleus nTPM: 241.9
2452
Male, age 74, both hemispheres
301.4
2322
Female, age 91, both hemispheres
246.7
2333
Male, age 80, both hemispheres
243.6
2325
Male, age 76, both hemispheres
175.9
Spinal trigeminal nucleus, oral nTPM: 212.6
2164
Male, age 80, both hemispheres
258.1
2737
Female, age 85, both hemispheres
204.9
1978
Male, age 76, both hemispheres
174.9
Subcoeruleus area nTPM: 195.4
2369
Female, age 85, left hemisphere
213.4
2451
Male, age 74, both hemispheres
209.3
2089
Male, age 76, left hemisphere
207.5
1958
Male, age 80, both hemispheres
180.1
2323
Female, age 91, left hemisphere
166.6
Superior olive nTPM: 221.8
2561
Female, age 91, both hemispheres
274.2
2329
Male, age 80, right hemisphere
258.2
2020
Male, age 76, both hemispheres
203.8
1875
Female, age 85, both hemispheres
188.6
2364
Male, age 74, right hemisphere
184.2
Ventral periolivary nuclei nTPM: 207.7
2165
Male, age 80, both hemispheres
233.1
2794
Female, age 91, left hemisphere
208.3
2130
Female, age 85, both hemispheres
204.4
2023
Male, age 76, both hemispheres
185.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 212.9
2456
Female, age 91, both hemispheres
267.2
2449
Male, age 74, both hemispheres
257.5
2161
Male, age 80, both hemispheres
208.6
1959
Male, age 76, both hemispheres
203.7
2840
Female, age 85, both hemispheres
189.7
2359
Male, age 61, both hemispheres
150.5
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
100.8
Pig sample
Sample description
nTPM
Pons nTPM: 100.8
Samples: 4
Max nTPM: 123.3
Min nTPM: 74.5
Sample A
Female
116.4
Sample B
Female
74.5
Sample C
Male
88.8
Sample D
Male
123.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
