HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:48.4 nTPM
HPA Brain:31.1 nTPM
GTEx:48.4 nTPM
FANTOM5:20.0 Scaled Tags Per Million
Pig:7.8 nTPM
Mouse:8.9 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB011232
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.1
Sample id Sample description nTPM
Hippocampus
nTPM: 30.4
1898 Male, age 80, left hemisphere 37.2
1855 Male, age 76, left hemisphere 32.9
2529 Female, age 94, left hemisphere 30.1
2621 Female, age 67, right hemisphere 27.8
1911 Female, age 85, right hemisphere 27.4
2148 Female, age 91, left hemisphere 26.9
Dentate gyrus
nTPM: 27.6
2528 Male, age 74, both hemispheres 33.8
2530 Female, age 94, left hemisphere 33.7
2010 Male, age 76, both hemispheres 29.9
1927 Female, age 91, both hemispheres 24.9
2246 Female, age 85, both hemispheres 22.6
2531 Female, age 67, both hemispheres 20.5
Entorhinal gyrus
nTPM: 26.1
2117 Female, age 91, right hemisphere 40.0
2764 Male, age 80, right hemisphere 25.9
1787 Male, age 76, left hemisphere 25.4
1938 Female, age 85, left hemisphere 24.8
2613 Female, age 94, left hemisphere 20.3
2686 Male, age 75, right hemisphere 20.1
Hippocampus, CA1
nTPM: 23.8
2082 Female, age 91, right hemisphere 32.3
2527 Male, age 74, both hemispheres 25.6
1873 Female, age 85, both hemispheres 23.6
2045 Male, age 76, both hemispheres 20.7
2749 Male, age 80, left hemisphere 17.0
Hippocampus, CA2
nTPM: 31.1
1940 Female, age 85, left hemisphere 38.0
1963 Male, age 80, left hemisphere 33.0
2249 Male, age 74, both hemispheres 32.9
2113 Female, age 91, right hemisphere 30.8
2437 Female, age 94, left hemisphere 30.2
1892 Male, age 76, both hemispheres 21.5
Hippocampus, CA3
nTPM: 23.3
2436 Male, age 74, both hemispheres 30.8
1891 Female, age 85, both hemispheres 28.3
1867 Male, age 76, both hemispheres 25.9
2861 Female, age 67, both hemispheres 21.0
2137 Male, age 80, left hemisphere 17.2
2620 Female, age 94, left hemisphere 16.6
Parahippocampal cortex
nTPM: 23.2
2250 Female, age 67, right hemisphere 31.3
2018 Male, age 76, both hemispheres 28.0
1990 Female, age 91, right hemisphere 26.0
2245 Female, age 91, both hemispheres 23.8
1933 Female, age 85, both hemispheres 23.0
2692 Male, age 74, both hemispheres 21.4
2532 Female, age 72, left hemisphere 21.2
1850 Male, age 80, both hemispheres 20.4
2622 Female, age 67, right hemisphere 19.6
2693 Female, age 94, both hemispheres 17.8
Perirhinal gyrus
nTPM: 19.7
2521 Female, age 94, right hemisphere 23.1
1847 Female, age 91, left hemisphere 21.5
1794 Male, age 80, right hemisphere 18.1
1841 Female, age 85, right hemisphere 18.0
2848 Male, age 76, right hemisphere 17.7
Subiculum
nTPM: 30.0
2042 Male, age 76, both hemispheres 40.4
2729 Female, age 91, right hemisphere 34.5
1901 Male, age 80, both hemispheres 30.4
2619 Male, age 74, both hemispheres 28.4
1977 Female, age 85, both hemispheres 25.7
2438 Female, age 94, left hemisphere 20.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.4
Samples: 197

Max nTPM: 150.8
Min nTPM: 15.2
Std nTPM: 19.8
Median nTPM: 46.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 150.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 132.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 111.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 93.1
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 91.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 90.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 90.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 88.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 87.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 85.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 84.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.0
FF:10153-102I9 76 years, female 22.4
FF:10169-103B7 60 years, female 17.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 7.8
Pig sample Sample description nTPM
Subiculum
nTPM: 6.3
Samples: 4

Max nTPM: 7.7
Min nTPM: 3.2
Sample A Female 7.7
Sample B Female 3.2
Sample C Male 7.7
Sample D Male 6.6
Dorsal hippocampus
nTPM: 7.9
Samples: 4

Max nTPM: 13.2
Min nTPM: 2.9
Sample A Female 13.2
Sample B Female 4.1
Sample C Male 11.2
Sample D Male 2.9
Entorhinal cortex
nTPM: 4.7
Samples: 4

Max nTPM: 6.7
Min nTPM: 2.3
Sample A Female 5.3
Sample B Female 4.4
Sample C Male 6.7
Sample D Male 2.3
Ventral hippocampus
nTPM: 7.2
Samples: 4

Max nTPM: 11.6
Min nTPM: 3.1
Sample A Female 8.7
Sample B Female 3.1
Sample C Male 11.6
Sample D Male 5.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.8
Samples: 4

Max nTPM: 9.8
Min nTPM: 5.7
Sample A Male 9.3
Sample B Male 9.8
Sample C Female 6.2
Sample D Female 5.7
Hippocampal formation
nTPM: 9.0
Samples: 4

Max nTPM: 15.3
Min nTPM: 5.7
Sample A Male 5.7
Sample B Male 6.7
Sample C Female 8.1
Sample D Female 15.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
2071 Antisense, RP_040420_01_B06, Mouse strain C57BL/6J (56 days, male) 0.4
2072 Antisense, RP_040420_01_B06, Mouse strain C57BL/6J (56 days, male) 0.2
79556668 Antisense, RP_071204_01_C01, Mouse strain C57BL/6J (56 days, male) 0.0
79632284 Antisense, RP_071204_01_C01, Mouse strain C57BL/6J (56 days, male) 0.0

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