HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:71.8 nTPM
HPA Brain:60.6 nTPM
GTEx:71.8 nTPM
FANTOM5:95.1 Scaled Tags Per Million
Pig:76.8 nTPM
Mouse:183.8 nTPM
Allen mouse:10.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000994Antibody CAB008681
Glial cells LowMedium
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.6
Sample id Sample description nTPM
Hippocampus
nTPM: 60.6
1898 Male, age 80, left hemisphere 67.6
2529 Female, age 94, left hemisphere 61.1
1855 Male, age 76, left hemisphere 59.8
2621 Female, age 67, right hemisphere 59.3
2148 Female, age 91, left hemisphere 58.6
1911 Female, age 85, right hemisphere 57.4
Dentate gyrus
nTPM: 56.1
2528 Male, age 74, both hemispheres 59.7
2530 Female, age 94, left hemisphere 59.4
2010 Male, age 76, both hemispheres 57.4
1927 Female, age 91, both hemispheres 57.3
2246 Female, age 85, both hemispheres 54.9
2531 Female, age 67, both hemispheres 48.1
Entorhinal gyrus
nTPM: 60.6
1938 Female, age 85, left hemisphere 64.7
2117 Female, age 91, right hemisphere 63.4
2764 Male, age 80, right hemisphere 63.1
1787 Male, age 76, left hemisphere 59.3
2686 Male, age 75, right hemisphere 59.2
2613 Female, age 94, left hemisphere 53.7
Hippocampus, CA1
nTPM: 59.9
2749 Male, age 80, left hemisphere 73.6
2527 Male, age 74, both hemispheres 62.7
1873 Female, age 85, both hemispheres 57.9
2082 Female, age 91, right hemisphere 53.1
2045 Male, age 76, both hemispheres 52.2
Hippocampus, CA2
nTPM: 58.3
1963 Male, age 80, left hemisphere 68.3
1892 Male, age 76, both hemispheres 62.3
2249 Male, age 74, both hemispheres 57.8
2437 Female, age 94, left hemisphere 55.7
2113 Female, age 91, right hemisphere 53.1
1940 Female, age 85, left hemisphere 52.6
Hippocampus, CA3
nTPM: 58.2
2436 Male, age 74, both hemispheres 67.5
2137 Male, age 80, left hemisphere 60.8
1867 Male, age 76, both hemispheres 56.9
2861 Female, age 67, both hemispheres 56.2
1891 Female, age 85, both hemispheres 55.0
2620 Female, age 94, left hemisphere 52.6
Parahippocampal cortex
nTPM: 58.0
1850 Male, age 80, both hemispheres 63.4
2692 Male, age 74, both hemispheres 62.1
1933 Female, age 85, both hemispheres 60.4
2250 Female, age 67, right hemisphere 60.4
2622 Female, age 67, right hemisphere 59.6
1990 Female, age 91, right hemisphere 59.0
2245 Female, age 91, both hemispheres 57.5
2018 Male, age 76, both hemispheres 55.6
2532 Female, age 72, left hemisphere 53.9
2693 Female, age 94, both hemispheres 47.9
Perirhinal gyrus
nTPM: 57.5
1847 Female, age 91, left hemisphere 66.0
1794 Male, age 80, right hemisphere 62.8
1841 Female, age 85, right hemisphere 54.3
2848 Male, age 76, right hemisphere 52.8
2521 Female, age 94, right hemisphere 51.7
Subiculum
nTPM: 57.2
2619 Male, age 74, both hemispheres 63.3
1901 Male, age 80, both hemispheres 60.4
2042 Male, age 76, both hemispheres 58.8
1977 Female, age 85, both hemispheres 57.1
2729 Female, age 91, right hemisphere 53.4
2438 Female, age 94, left hemisphere 50.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 71.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 71.8
Samples: 197

Max nTPM: 128.2
Min nTPM: 41.8
Std nTPM: 13.4
Median nTPM: 70.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 128.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 127.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 114.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 106.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 100.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 99.7
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 99.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 98.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 97.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 95.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 94.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 95.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 95.1
FF:10169-103B7 60 years, female 108.0
FF:10153-102I9 76 years, female 82.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 76.8
Pig sample Sample description nTPM
Subiculum
nTPM: 68.4
Samples: 4

Max nTPM: 89.1
Min nTPM: 54.9
Sample A Female 89.1
Sample B Female 62.6
Sample C Male 66.9
Sample D Male 54.9
Dorsal hippocampus
nTPM: 76.8
Samples: 4

Max nTPM: 103.4
Min nTPM: 53.7
Sample A Female 103.4
Sample B Female 67.6
Sample C Male 82.6
Sample D Male 53.7
Entorhinal cortex
nTPM: 63.7
Samples: 4

Max nTPM: 75.3
Min nTPM: 49.5
Sample A Female 64.0
Sample B Female 65.8
Sample C Male 75.3
Sample D Male 49.5
Ventral hippocampus
nTPM: 74.9
Samples: 4

Max nTPM: 99.5
Min nTPM: 50.2
Sample A Female 79.9
Sample B Female 50.2
Sample C Male 99.5
Sample D Male 70.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 183.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 183.8
Samples: 4

Max nTPM: 193.7
Min nTPM: 175.8
Sample A Male 175.8
Sample B Male 181.2
Sample C Female 193.7
Sample D Female 184.4
Hippocampal formation
nTPM: 181.4
Samples: 4

Max nTPM: 190.3
Min nTPM: 164.2
Sample A Male 182.4
Sample B Male 164.2
Sample C Female 188.5
Sample D Female 190.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.7
71670705 Antisense, RP_050517_01_D03, Mouse strain C57BL/6J (56 days, male) 10.7
70192153 Antisense, RP_050517_01_D03, Mouse strain C57BL/6J (56 days, male) 10.4

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