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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
20.6
nTPM
HPA Brain:
49.7
nTPM
GTEx:
20.6
nTPM
FANTOM5:
12.8
Scaled Tags Per Million
Pig:
2.5
nTPM
Mouse:
4.0
nTPM
AMYGDALA - HPA Brain RNA-seq
Max nTPM
49.7
Sample id
Sample description
nTPM
Amygdala nTPM: 42.9
2814
Male, age 76, right hemisphere
61.9
2695
Female, age 67, right hemisphere
42.1
2514
Male, age 75, right hemisphere
38.7
1987
Female, age 91, left hemisphere
37.3
2517
Female, age 94, left hemisphere
34.5
Basal amygdala nTPM: 36.9
1955
Male, age 76, both hemispheres
42.7
2827
Female, age 67, right hemisphere
42.0
2685
Female, age 94, left hemisphere
40.3
2609
Male, age 75, right hemisphere
34.9
2110
Male, age 80, left hemisphere
33.5
2243
Female, age 91, right hemisphere
28.0
Central amygdala nTPM: 42.7
1905
Male, age 76, both hemispheres
60.5
2701
Female, age 91, right hemisphere
45.8
2826
Female, age 94, left hemisphere
38.4
2239
Male, age 80, left hemisphere
35.1
2515
Male, age 75, right hemisphere
33.6
Corticomedial amygdala nTPM: 27.0
2240
Male, age 76, both hemispheres
31.1
2428
Male, age 75, right hemisphere
29.4
2429
Female, age 94, left hemisphere
29.4
2535
Female, age 67, right hemisphere
28.5
2829
Male, age 80, left hemisphere
24.8
2242
Female, age 91, right hemisphere
18.5
Lateral amygdala nTPM: 49.7
2830
Female, age 67, right hemisphere
55.4
1883
Male, age 76, both hemispheres
55.1
2256
Male, age 80, left hemisphere
50.2
2516
Male, age 75, right hemisphere
47.3
2255
Female, age 91, right hemisphere
45.6
2534
Female, age 94, left hemisphere
44.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
20.6
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 20.6
Samples: 152
Max nTPM: 78.4
Min nTPM: 0.9
Std nTPM: 9.2
Median nTPM: 18.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
78.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
51.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
41.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
39.3
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
39.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
37.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
36.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
35.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
35.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
34.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
33.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
33.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
33.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
33.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
32.9
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
32.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
32.0
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
31.5
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
31.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
29.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
29.5
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
29.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
28.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
28.9
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
28.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
28.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
28.6
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
28.2
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
27.9
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
27.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
27.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
26.2
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
26.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
26.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
25.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
25.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
25.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
25.2
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
24.8
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
24.6
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
24.5
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
24.4
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
24.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
24.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
23.9
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
23.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
23.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
23.1
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
23.0
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
22.9
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
22.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
22.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
21.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
21.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
21.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
21.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
20.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
20.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
20.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
20.5
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
20.4
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
20.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
20.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
20.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
19.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
19.4
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
19.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
19.1
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
19.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
19.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
18.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
18.8
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
18.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
18.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
18.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
18.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
18.3
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
18.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
18.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
18.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
18.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
18.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
17.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
17.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
17.8
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
17.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
17.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
17.5
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
17.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
17.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
17.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
17.3
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
17.0
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
17.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
16.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
16.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
16.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
16.7
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
16.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
16.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
16.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
16.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
16.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
16.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
16.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
16.2
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
16.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
16.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
16.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
15.8
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
15.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
15.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
15.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
15.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
14.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
14.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
14.5
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
14.4
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
14.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
14.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
14.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
14.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
14.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
14.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
14.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
13.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
13.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
13.2
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
13.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
13.2
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
13.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
12.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
12.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
12.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
11.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
11.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
11.5
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
11.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
11.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
11.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
11.1
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
10.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
10.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
10.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
10.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
10.0
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
9.5
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
8.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
7.1
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
6.2
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
5.3
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
0.9
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.