HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:30.8 nTPM
HPA Brain:49.2 nTPM
GTEx:30.8 nTPM
FANTOM5:16.3 Scaled Tags Per Million
Pig:3.6 nTPM
Mouse:2.8 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005696Antibody HPA024654
Glial cells HighMedium
Neuronal cells MediumNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.2
Sample id Sample description nTPM
Hippocampus
nTPM: 35.4
1911 Female, age 85, right hemisphere 46.6
2529 Female, age 94, left hemisphere 36.2
2148 Female, age 91, left hemisphere 35.1
2621 Female, age 67, right hemisphere 32.0
1898 Male, age 80, left hemisphere 31.3
1855 Male, age 76, left hemisphere 31.2
Dentate gyrus
nTPM: 35.3
2530 Female, age 94, left hemisphere 48.2
2528 Male, age 74, both hemispheres 43.7
2010 Male, age 76, both hemispheres 37.8
2246 Female, age 85, both hemispheres 30.7
1927 Female, age 91, both hemispheres 27.0
2531 Female, age 67, both hemispheres 24.7
Entorhinal gyrus
nTPM: 37.9
2117 Female, age 91, right hemisphere 63.9
2764 Male, age 80, right hemisphere 52.1
1938 Female, age 85, left hemisphere 32.5
1787 Male, age 76, left hemisphere 29.6
2686 Male, age 75, right hemisphere 27.5
2613 Female, age 94, left hemisphere 22.0
Hippocampus, CA1
nTPM: 30.7
2082 Female, age 91, right hemisphere 42.4
1873 Female, age 85, both hemispheres 36.6
2527 Male, age 74, both hemispheres 33.8
2749 Male, age 80, left hemisphere 24.9
2045 Male, age 76, both hemispheres 15.7
Hippocampus, CA2
nTPM: 37.1
2249 Male, age 74, both hemispheres 45.7
1963 Male, age 80, left hemisphere 43.4
2437 Female, age 94, left hemisphere 39.1
2113 Female, age 91, right hemisphere 38.3
1940 Female, age 85, left hemisphere 33.6
1892 Male, age 76, both hemispheres 22.7
Hippocampus, CA3
nTPM: 28.8
1891 Female, age 85, both hemispheres 46.5
2620 Female, age 94, left hemisphere 40.8
1867 Male, age 76, both hemispheres 29.8
2436 Male, age 74, both hemispheres 24.1
2137 Male, age 80, left hemisphere 16.8
2861 Female, age 67, both hemispheres 14.8
Parahippocampal cortex
nTPM: 28.7
2692 Male, age 74, both hemispheres 45.8
2532 Female, age 72, left hemisphere 39.1
1990 Female, age 91, right hemisphere 38.6
2018 Male, age 76, both hemispheres 30.0
1850 Male, age 80, both hemispheres 29.1
2245 Female, age 91, both hemispheres 28.0
1933 Female, age 85, both hemispheres 25.0
2693 Female, age 94, both hemispheres 20.8
2250 Female, age 67, right hemisphere 15.4
2622 Female, age 67, right hemisphere 14.7
Perirhinal gyrus
nTPM: 19.4
1794 Male, age 80, right hemisphere 24.6
2521 Female, age 94, right hemisphere 21.1
1847 Female, age 91, left hemisphere 18.6
2848 Male, age 76, right hemisphere 18.5
1841 Female, age 85, right hemisphere 14.1
Subiculum
nTPM: 49.2
2042 Male, age 76, both hemispheres 71.7
1901 Male, age 80, both hemispheres 61.3
2619 Male, age 74, both hemispheres 43.9
2729 Female, age 91, right hemisphere 40.6
1977 Female, age 85, both hemispheres 40.2
2438 Female, age 94, left hemisphere 37.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.8
Samples: 197

Max nTPM: 167.9
Min nTPM: 2.3
Std nTPM: 20.5
Median nTPM: 26.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 167.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 97.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 93.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 90.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 85.6
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 83.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 82.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 72.6
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 71.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 69.1
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 66.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.3
FF:10169-103B7 60 years, female 18.6
FF:10153-102I9 76 years, female 13.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.6
Pig sample Sample description nTPM
Subiculum
nTPM: 2.3
Samples: 4

Max nTPM: 3.3
Min nTPM: 1.4
Sample A Female 3.3
Sample B Female 1.4
Sample C Male 1.8
Sample D Male 2.7
Dorsal hippocampus
nTPM: 3.7
Samples: 4

Max nTPM: 5.9
Min nTPM: 2.1
Sample A Female 5.9
Sample B Female 2.1
Sample C Male 4.5
Sample D Male 2.1
Entorhinal cortex
nTPM: 2.1
Samples: 4

Max nTPM: 3.0
Min nTPM: 1.4
Sample A Female 2.4
Sample B Female 1.6
Sample C Male 3.0
Sample D Male 1.4
Ventral hippocampus
nTPM: 3.2
Samples: 4

Max nTPM: 4.5
Min nTPM: 1.6
Sample A Female 3.0
Sample B Female 1.6
Sample C Male 3.6
Sample D Male 4.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.9
Samples: 4

Max nTPM: 2.3
Min nTPM: 1.5
Sample A Male 2.3
Sample B Male 1.5
Sample C Female 2.1
Sample D Female 1.6
Hippocampal formation
nTPM: 2.8
Samples: 4

Max nTPM: 4.1
Min nTPM: 2.0
Sample A Male 2.1
Sample B Male 2.0
Sample C Female 2.9
Sample D Female 4.1

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