HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:39.0 nTPM
HPA Brain:91.2 nTPM
GTEx:39.0 nTPM
FANTOM5:169.9 Scaled Tags Per Million
Pig:61.1 nTPM
Mouse:72.5 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001784
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 91.2
Sample id Sample description nTPM
Hippocampus
nTPM: 82.9
2621 Female, age 67, right hemisphere 98.6
2529 Female, age 94, left hemisphere 93.5
2148 Female, age 91, left hemisphere 87.0
1911 Female, age 85, right hemisphere 76.8
1898 Male, age 80, left hemisphere 74.1
1855 Male, age 76, left hemisphere 67.5
Dentate gyrus
nTPM: 76.3
2530 Female, age 94, left hemisphere 91.3
2531 Female, age 67, both hemispheres 85.6
1927 Female, age 91, both hemispheres 83.3
2528 Male, age 74, both hemispheres 70.2
2246 Female, age 85, both hemispheres 65.2
2010 Male, age 76, both hemispheres 62.0
Entorhinal gyrus
nTPM: 91.2
2613 Female, age 94, left hemisphere 110.3
2686 Male, age 75, right hemisphere 105.5
2764 Male, age 80, right hemisphere 90.4
2117 Female, age 91, right hemisphere 88.0
1938 Female, age 85, left hemisphere 77.2
1787 Male, age 76, left hemisphere 75.6
Hippocampus, CA1
nTPM: 66.8
1873 Female, age 85, both hemispheres 74.4
2749 Male, age 80, left hemisphere 72.5
2527 Male, age 74, both hemispheres 71.0
2082 Female, age 91, right hemisphere 62.4
2045 Male, age 76, both hemispheres 53.6
Hippocampus, CA2
nTPM: 78.5
1963 Male, age 80, left hemisphere 103.0
2437 Female, age 94, left hemisphere 99.7
1892 Male, age 76, both hemispheres 78.2
2113 Female, age 91, right hemisphere 69.5
1940 Female, age 85, left hemisphere 62.1
2249 Male, age 74, both hemispheres 58.6
Hippocampus, CA3
nTPM: 78.0
2861 Female, age 67, both hemispheres 104.4
2620 Female, age 94, left hemisphere 81.6
1867 Male, age 76, both hemispheres 75.4
1891 Female, age 85, both hemispheres 73.2
2137 Male, age 80, left hemisphere 71.9
2436 Male, age 74, both hemispheres 61.2
Parahippocampal cortex
nTPM: 83.6
2622 Female, age 67, right hemisphere 103.6
2692 Male, age 74, both hemispheres 95.4
2532 Female, age 72, left hemisphere 92.9
2245 Female, age 91, both hemispheres 92.4
1990 Female, age 91, right hemisphere 82.0
2693 Female, age 94, both hemispheres 78.2
1850 Male, age 80, both hemispheres 78.1
2250 Female, age 67, right hemisphere 73.2
1933 Female, age 85, both hemispheres 72.2
2018 Male, age 76, both hemispheres 67.7
Perirhinal gyrus
nTPM: 79.3
1847 Female, age 91, left hemisphere 84.5
1794 Male, age 80, right hemisphere 81.1
1841 Female, age 85, right hemisphere 78.6
2848 Male, age 76, right hemisphere 76.8
2521 Female, age 94, right hemisphere 75.6
Subiculum
nTPM: 80.8
2438 Female, age 94, left hemisphere 97.6
2619 Male, age 74, both hemispheres 91.5
1977 Female, age 85, both hemispheres 76.9
1901 Male, age 80, both hemispheres 74.5
2042 Male, age 76, both hemispheres 72.2
2729 Female, age 91, right hemisphere 71.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.0
Samples: 197

Max nTPM: 79.1
Min nTPM: 19.4
Std nTPM: 11.2
Median nTPM: 36.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 79.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 77.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 73.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 70.2
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 69.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 68.6
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 68.0
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 67.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 66.0
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 65.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 61.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 169.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 169.9
FF:10153-102I9 76 years, female 203.9
FF:10169-103B7 60 years, female 136.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 61.1
Pig sample Sample description nTPM
Subiculum
nTPM: 58.5
Samples: 4

Max nTPM: 77.3
Min nTPM: 46.3
Sample A Female 77.3
Sample B Female 50.6
Sample C Male 59.6
Sample D Male 46.3
Dorsal hippocampus
nTPM: 54.8
Samples: 4

Max nTPM: 63.8
Min nTPM: 47.7
Sample A Female 63.8
Sample B Female 52.4
Sample C Male 55.2
Sample D Male 47.7
Entorhinal cortex
nTPM: 61.1
Samples: 4

Max nTPM: 71.6
Min nTPM: 53.8
Sample A Female 62.4
Sample B Female 56.7
Sample C Male 71.6
Sample D Male 53.8
Ventral hippocampus
nTPM: 61.2
Samples: 4

Max nTPM: 85.0
Min nTPM: 44.0
Sample A Female 55.5
Sample B Female 44.0
Sample C Male 85.0
Sample D Male 60.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 72.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 72.6
Samples: 4

Max nTPM: 74.8
Min nTPM: 69.7
Sample A Male 74.8
Sample B Male 71.4
Sample C Female 69.7
Sample D Female 74.3
Hippocampal formation
nTPM: 54.8
Samples: 4

Max nTPM: 58.3
Min nTPM: 50.7
Sample A Male 58.3
Sample B Male 51.8
Sample C Female 50.7
Sample D Female 58.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
72001863 Antisense, RP_050915_02_D04, Mouse strain C57BL/6J (56 days, male) 1.0

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